Transcript Information: S_Transcript_6615.p1


Annotated TAIR IDAT4G21300.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11336479-11339052 | Forward length=857
E-Value2E-106
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.3530427274596
Replicate 27.8622499679056
Replicate 37.2091699918627
Condition 2: 8 Hour
Replicate 19.5077093407626
Replicate 29.8337796218579
Replicate 39.536917688257
Condition 3: 24 Hour
Replicate 19.6364399699481
Replicate 210.033272942747
Replicate 39.8987615404694


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6615.p1 GENE.S_Transcript_6615~~S_Transcript_6615.p1 ORF type:complete len:637 (+),score=89.36,PPR|PF01535.16|0.21,PPR|PF01535.16|0.0054,PPR|PF01535.16|2.1,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.017,PPR|PF01535.16|96,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|0.12,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.11,PPR|PF01535.16|8.8e+03,PPR_2|PF13041.2|0.2,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|35,PPR_2|PF13041.2|4.6e-07,PPR_2|PF13041.2|8.3e+03,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|1.9e+03,PPR_2|PF13041.2|8.4e-07,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|2.7e-14,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|1.5,PPR_1|PF12854.3|25,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|7.8,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|54,PPR_1|PF12854.3|4.3e+03,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|2,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.16,PPR_3|PF13812.2|8e+02,PPR_3|PF13812.2|9e+02,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.047,PPR_3|PF13812.2|25,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.85,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|0.076,PPR_3|PF13812.2|66,PPR_3|PF13812.2|1.1e+04 S_Transcript_6615:838-2748(+)
ATGTTAGATAATGGTTTTGTCATAGAAGAGTTTCATTCATTCCCTGTTTTAGTTAAAGCTGTTGGTGGTCTTAATGATTTTGAATTAAACAGGCAGTTTCATGGGTATTTGATGAAATTAGGAGTCATTAAGAATAACTATGTAGCAAATTCTCTTTTGAGTGCTCTATGGAAATGTGGCGCAAGTGATTATGCACTTAGGCTGTTTGAGGCCATGCCGGTGAGGGATTCGGTTTCGTGGAGTACTATGATATGGGGGTTTCATCAATCGGGTTTGTATACTAGGTCATTAGAATGGTTTAGATGCATGATTACTGAATCTGGAATATATCCAAATAAGGTGGCTTGCCTTTCTGCTCTTGCATCATGTGGTTCGATGCAGGCTCTAATACATGGACGGGAAGTACATGCTTTTGTGATTAAAAGTGGGTTGGATGTTGATGAATTTTTGTTGAATGGATTGCTTGAGATGTATATGAAATGTGGGTGTGTGAGAGTTGCCGAACAACTTTTTGAGAGCATTGTTGATGATGTAAGAGAAAATACTGTGTTCTGGAATGTCATGATTTTGGGTTATGTGGAGAATGGTTATGTCTTGGACGCATTAGATTGTTTCATTGAGATGATGATGTCTGGTGTTGTACCGGATTCTTCAGCTATGGTTGCAGTTCTAATCTTGTGTTCAGAGTCCTCAAATTTAGCTTTCGGGGAGCAAATCCATGCCCTTAGCATCAAAATTGGTGTAGAGATGGATGTTAGAGTTAGAACATCACTAATAGACATGTACTTCAATGCTGTCAGTCAGGACTGTGGGTTGAAATTGTTTGATGGGTCTCATAGTCGTAATTTAGTCATGTGGGGCACTGTAATCTCGAATTGTGCTCGAAGTGGTTATTCCAGGAAAGCACTTGATTTATTTATTGCTGGATTTGAACATGGCTTTTTGGACTCTATGACATTGTTGGCTGCACTACGAGCTTGTTCCTCCCTAACCCTTAAGTATGAAGGTATGGTGATCCATGGAATGGCTGTTAAGTTGGGGTTGGACCTTGATAAGTACATTGGTAGTGCACTAATTGATATGTATGCAAAATGCCAAGATATGATGTCCGCCCAAAGCACTTTTCTACATTTACCCGTGAAGGACGATGTATCATGGAGTAGTCTCATATCTGGATATGCTAATAATGAATGCTGGGATGATGCTGTGGAAGCTTTTTATGAAATGCAGCATCATCGGATCAAGCCCAACGCTGTGCTAATTGCATGTGTCCTATCGATTTGTGCTCGTGTGTTTACAAATTTACATTGTAAAGAAATTCATGGCTATATTATACGCCAAATATTTGAGGCAAATACTCTTGTGAACAACTCCCTCATAGCAACCTATGCAAAATGTGGGAACTTGAAAAGCTCACAGAGAATCTTCGTGCAGATGGAGGACAAAGATGAAGTAACGTGGAATTCAATTATGCTTGGTCTAGGGCAGCATGGCCACGTTGAAGAAATGTTTGGTTTATTTCAGAGAATGAAAGAGGCTGGCTTGAAGCCTGACCACCAGACATTTACTGCTATGCTGTCTGCATGTAGTCATACAGGAAGAGTCACAGAGGGATTGGAGTATTTTCGAAGCATGATAGAAGAGCACAAACTCGAACCTAAACTTGAGCAATACACTTGTTTGGTCGATATTTTTGGTCGAGCTGGCTATTTAGAGCAAGCATACGAACTGATATTATCTATGCCTTACACCCCAGATGATAGGATTTGGGGATCGTTGCTTGGATCTTGTAGAAATTATGGCAATGGAAGGCTGGCAGAGCTTGTAGCCAATCACATTTTCGAGTTAAATCCTGCTAGTATAGGTTATCGTGTACTTCTGGCCAACTTGTACGAGGATGCAGGTAATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6615.p1 GENE.S_Transcript_6615~~S_Transcript_6615.p1 ORF type:complete len:637 (+),score=89.36,PPR|PF01535.16|0.21,PPR|PF01535.16|0.0054,PPR|PF01535.16|2.1,PPR|PF01535.16|1.4e-05,PPR|PF01535.16|1.2e+04,PPR|PF01535.16|0.017,PPR|PF01535.16|96,PPR|PF01535.16|2.5e-06,PPR|PF01535.16|0.12,PPR|PF01535.16|1.7e-07,PPR|PF01535.16|0.00016,PPR|PF01535.16|0.11,PPR|PF01535.16|8.8e+03,PPR_2|PF13041.2|0.2,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|35,PPR_2|PF13041.2|4.6e-07,PPR_2|PF13041.2|8.3e+03,PPR_2|PF13041.2|1.3,PPR_2|PF13041.2|1.9e+03,PPR_2|PF13041.2|8.4e-07,PPR_2|PF13041.2|2.3,PPR_2|PF13041.2|2.7e-14,PPR_2|PF13041.2|0.14,PPR_2|PF13041.2|1.5,PPR_1|PF12854.3|25,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|7.8,PPR_1|PF12854.3|2.8,PPR_1|PF12854.3|54,PPR_1|PF12854.3|4.3e+03,PPR_1|PF12854.3|0.0021,PPR_1|PF12854.3|2,PPR_1|PF12854.3|0.022,PPR_1|PF12854.3|0.11,PPR_1|PF12854.3|0.16,PPR_3|PF13812.2|8e+02,PPR_3|PF13812.2|9e+02,PPR_3|PF13812.2|2.6e+03,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|0.047,PPR_3|PF13812.2|25,PPR_3|PF13812.2|7.5e+02,PPR_3|PF13812.2|2.3,PPR_3|PF13812.2|0.85,PPR_3|PF13812.2|0.00015,PPR_3|PF13812.2|0.076,PPR_3|PF13812.2|66,PPR_3|PF13812.2|1.1e+04 S_Transcript_6615:838-2748(+)
MLDNGFVIEEFHSFPVLVKAVGGLNDFELNRQFHGYLMKLGVIKNNYVANSLLSALWKCGASDYALRLFEAMPVRDSVSWSTMIWGFHQSGLYTRSLEWFRCMITESGIYPNKVACLSALASCGSMQALIHGREVHAFVIKSGLDVDEFLLNGLLEMYMKCGCVRVAEQLFESIVDDVRENTVFWNVMILGYVENGYVLDALDCFIEMMMSGVVPDSSAMVAVLILCSESSNLAFGEQIHALSIKIGVEMDVRVRTSLIDMYFNAVSQDCGLKLFDGSHSRNLVMWGTVISNCARSGYSRKALDLFIAGFEHGFLDSMTLLAALRACSSLTLKYEGMVIHGMAVKLGLDLDKYIGSALIDMYAKCQDMMSAQSTFLHLPVKDDVSWSSLISGYANNECWDDAVEAFYEMQHHRIKPNAVLIACVLSICARVFTNLHCKEIHGYIIRQIFEANTLVNNSLIATYAKCGNLKSSQRIFVQMEDKDEVTWNSIMLGLGQHGHVEEMFGLFQRMKEAGLKPDHQTFTAMLSACSHTGRVTEGLEYFRSMIEEHKLEPKLEQYTCLVDIFGRAGYLEQAYELILSMPYTPDDRIWGSLLGSCRNYGNGRLAELVANHIFELNPASIGYRVLLANLYEDAGN*

Click here to download the sequence:
Link to NCBI Protein BLAST