Transcript Information: S_Transcript_66229.p1


Annotated TAIR IDAT4G20325.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleus; CONTAINS InterPro DOMAIN/s: Ribonuclease H2, subunit B (InterPro:IPR019024); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:10980124-10982426 | Forward length=277
E-Value3.8E-78
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 15.9140002744846
Replicate 25.9923625958682
Replicate 35.6922024949385
Condition 2: 8 Hour
Replicate 17.2401016508785
Replicate 26.4905980621429
Replicate 35.9210687791615
Condition 3: 24 Hour
Replicate 14.180193754373
Replicate 26.8551035014878
Replicate 36.0719736530835


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66229.p1 GENE.S_Transcript_66229~~S_Transcript_66229.p1 ORF type:complete len:162 (+),score=30.40,RNase_H2-Ydr279|PF09468.6|5.6e-29 S_Transcript_66229:354-839(+)
ATGGCGGCTTGGTGGGAAAGTGCTGATGGTCATATTCGAGTTCTTATTGCCCCAGACCAAGGCACTCTATCCGACAATACTGGAGAATTGCTTTCATTACGCCATCCCAAATCTGGAGTTACAACCAATTTTCTCTTCATCAATGAGGGTCTTCAAGAACTGAATTGGTTTAAACAATCTCATAGTTCATGGTTTCTGGGGGACTATATATGTGAAGATGGAAGCTTATATACATCAACACCAGTCGATCCTGTCTTTATTCTACTACCAATATTTCAGGATGCTCGGATGAAGAAGGGGGATGATCCAGGGAAGTTCAGGCAATTAGATGAGATTATCTATGTTGATGGCTATCCTGGATATCAACGTTTGCTCCAGATTGCTGAGAAATCTATGAGTGTTGTTTGCGACATCAAAGAAATCGGGTCGACAAAGTTTTTCAGGCTTGATGATTCCAAGGTGCTTGCTTGGTTGTGTGCAAGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66229.p1 GENE.S_Transcript_66229~~S_Transcript_66229.p1 ORF type:complete len:162 (+),score=30.40,RNase_H2-Ydr279|PF09468.6|5.6e-29 S_Transcript_66229:354-839(+)
MAAWWESADGHIRVLIAPDQGTLSDNTGELLSLRHPKSGVTTNFLFINEGLQELNWFKQSHSSWFLGDYICEDGSLYTSTPVDPVFILLPIFQDARMKKGDDPGKFRQLDEIIYVDGYPGYQRLLQIAEKSMSVVCDIKEIGSTKFFRLDDSKVLAWLCAR*

Click here to download the sequence:
Link to NCBI Protein BLAST