Transcript Information: S_Transcript_66290.p1


Annotated TAIR IDAT2G21440.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:9173712-9179065 | Reverse length=1003
E-Value2.7E-247
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1660633956592
Replicate 26.4046135852646
Replicate 37.2921729259482
Condition 2: 8 Hour
Replicate 17.7915590247783
Replicate 27.2557346939654
Replicate 36.8919106870961
Condition 3: 24 Hour
Replicate 15.9040225650254
Replicate 25.2405810551914
Replicate 35.4534150065116


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66290.p1 GENE.S_Transcript_66290~~S_Transcript_66290.p1 ORF type:5prime_partial len:999 (+),score=265.27,RRM_1|PF00076.18|2.1e-18,RRM_1|PF00076.18|89,RRM_1|PF00076.18|2.1e-15,RRM_1|PF00076.18|8.2e-13,RRM_1|PF00076.18|1e-05,RRM_6|PF14259.2|1.1e-09,RRM_6|PF14259.2|3.2e-09,RRM_6|PF14259.2|2.7e-08,RRM_6|PF14259.2|3.8e+02,RRM_6|PF14259.2|0.012,RRM_5|PF13893.2|0.00027,RRM_5|PF13893.2|2.5e+03,RRM_5|PF13893.2|7e-06,RRM_5|PF13893.2|9.4e+03,RRM_5|PF13893.2|0.017,RRM_5|PF13893.2|0.96 S_Transcript_66290:1-2997(+)
CTCTCATCGCCCTTTCTCTTTTTATCACTCTTCCCTGTTTCTCCCCTGATGCCGTGCACTAAACCCTTCACTCCACCACCCTCTGTACCTCTTTCTTTCTCCCTCTTCCCGTCCAAGAAGATGGGCAAGAAGAACAAATCAAAGGAAGGCAACAAAACCGAGCATTGCCCAGCAACTGTTTTTGTCTCCAATCTGCCCTACACTTTCACCAACTCCCAGCTTGAAGAAACCTTCAGCGATGTTGGCCCTATACGACGTTGTTTCATGGTCACTAAGAAAGGCTCAACTGAACACAGGGGCTTTGGTTTTGTTCAATTTGCTACTGCGGAGGATGCTGATCGTTCCATTGAAATGAAAAATGGCTCATCTGTTGGAGGACGGAAAGTAGTGGTGAAACATGCTGCACATCGTGCTCCTTTAGAGCAGCGTCGACCGAAGCCAAATCAAGCTGATTCAAATGAAATTGATAAGACAACAGATGAGAAGGAGGGGGCCCCACAACCTGCTCCTGTAAAACATGAAAAGCCGCCAACTGAGCAGCAAATAGTAGGTAAATCCATTCAGCCTGTAAAGAGATCAAAGAAACCTAGTATTGGTGTAGCTGATGAAGGCAGTGCTTCAGAAAAACAAAGGGTGGCAAGGACTGTGATATTTGGAGGGCTGTTGAACTCTGAAATGGCAGATGAGGTCCTCCGTCGCGCCAAAGAGGTTGATGGAGTCTGTTCTGTAACATACCCACTTCCAAAACAAGAGCTAGAGCACCATGGTCTTGCCCAAGATGGATGCAGAATGGAAGCTGCAGCTGTACTTTATGCTAGTATTAGATCTGCACGTGCTTCTGTTGCTGCCCTGCACCAAAAAGAAGTGAATGGAGGATCAGTGTGGGCACGCCAGCTTGGTGGGGAGGGATCCAAGACTCAGAAGTGGAAACTTATACTCCGCAACCTTCCTTTTAAGGCAAAAATCAACGAGATAAAAGAAAAATTCACAGCGGCAGGTTTTGTTTGGGATGTGTTTATTCCCAAGAATTCTGAGACAGGGATGTCCAAGGGGTTTGCATTTGTTAAGTTCACTAGCAAGCAAGATGCAGAAAATGCTATCCTTAAGTTCAACGGGAAAAAATTTGGTTCAAGGATCATTGCTGTCGACTGGGCTGTTCCTAAGAAAATATATACAACCGGTGCTCATTCTGCAGTGGAGGATGTAGAGCATGAGGATGAAGATGCAGATAGTGATGATGATGACGATGCATCAGAGGATGATGGTTTGGATCTTGAGAAAAAGTCTGAAGCCTCCGATAAGTATGGCTTTGAGTCAGATTTTGCTGATGAGGAGGAAGAGGAAGATGTCTCTGCTGTAGTAAATTTTGATGAAGAATTAGAAATAGCACGAAGGGTCCTTCAAAATGTTATTACATCCTCTGTGAAAGAAGCATCATCCTTGAGCAAAGGTTCCAGCCTTGATAGGAATGGCACAAATTCTGATAAGTCAGTCGATGTTTCTAAGAAAGAAACGACTGAATCTGCGATGCTAGCGACACAGATGAAGGTGGAAAGCGCCCAAGAAGAAAAACAGAATGAATCTCTATCTAAAAACGCTGAAAATGATCTGCCAAGAACAGTTTTTATAAGCAATCTTCCTTTTGATTTGGACAATGAAGAAGTGAAGCAACGGTTTGCTAGTTTTGGAGAAGTGCAATCATTTTTTCCTGTGCTTCATCCAATCACCAAACGACCAAGAGGAACTGGATTCCTTAAGTTTGCTACTCCTAGTGCAGCAGATGCTGCAGTTTCTGCTGCAAATGCTGCACCTGGTCTGGGAATTTTTCTAAAAGGAAGGCTATTGAAGGTATTAAAGGCTTTGGACAAGAAATCAGCTCATGATAAAGCAGTTGAGAAGTCCAAAAATGAGAACCAAGACCAGCGTAATCTCTATCTAGCAAAGGAGGGTCTGATTGTTGAGGGAACTCCAGCTGCAGAAGGTGTTTCATCAGATGATTTGGAAAAGCGTCAAATGTTGCACCAGAAAAAGATGACAAAACTTCAGTCACCAAATTTTCATGTTTCAAGAACAAGACTAGTCATATACAATTTGCCAAAGTCAATGACTGAAAAAGAACTCAGACAGCTCTGTGTTGATGCGGTTACCTCAAAAGCGTCCAAGCAAAAGCCTTTGATACGACAGATAAAGTTTTTGAATGATGTTAAGAAAGGGAAGGTTAAAAGTCTTTCTCGCGGTGTTGCTTTTGTTGAGTTCGCAGATCATCAACATGCCATTGTGGCATTAAGGGTGCTTAACAACAATCCGGAAACTTTTGGCCCTCAGCATCGTCCAATTGTGGAATTCGCTATCGATAATATTCAGACACTGCGTAAGAGAAGCTTAAAACGCAATGATCAGCAGCTGAAGACAGAAGATAATCTTGATGATGTGCAACAAAATGATGATACCTCAAGTTCACCGACCAAATCAAACAAAGAGAAGTTCAGAAAAAGGAAATCACGGGAAGATTATAGATCAACGGAAGGTCAGGAGCCTGGCAGTGAAACCATGAAAGGAAATAGGACTTCTGCTGGAGTTTCCACTAAAGAGAATCAAGGAAATAAGAAGAAAAAGTGGACTGCAGCGCGAGAAGGAAATGACCAAACAACAGGGAATCGGAATAAGGTAAAGAAGAACCGAAAAGAGAAGAAGCTAAACCAAGACAAATCATCTCAAGACAAAAATGTAAGTTACAATGATGGTAAGTTAAAACCTTTAAAGGAAACAGATAAGCATCCGAAAAAGAGGAAGGCTAATGATCCTTCAGCTGAGGGGCAGAGTCCTAAGAAAAGAAGACGGAATAGGAACAAAGAACCTGTAGGCAAAGATGCTGTGGATAAGCTGGACATACTGATTGCACAATATCGATCCAAGTTTTCACAGAAGAAATCAGATAAATCTGATGGTGAAAAGCAAGGTTCTAAGCAGCAGATTAGAAGATGGTTCCAGACGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66290.p1 GENE.S_Transcript_66290~~S_Transcript_66290.p1 ORF type:5prime_partial len:999 (+),score=265.27,RRM_1|PF00076.18|2.1e-18,RRM_1|PF00076.18|89,RRM_1|PF00076.18|2.1e-15,RRM_1|PF00076.18|8.2e-13,RRM_1|PF00076.18|1e-05,RRM_6|PF14259.2|1.1e-09,RRM_6|PF14259.2|3.2e-09,RRM_6|PF14259.2|2.7e-08,RRM_6|PF14259.2|3.8e+02,RRM_6|PF14259.2|0.012,RRM_5|PF13893.2|0.00027,RRM_5|PF13893.2|2.5e+03,RRM_5|PF13893.2|7e-06,RRM_5|PF13893.2|9.4e+03,RRM_5|PF13893.2|0.017,RRM_5|PF13893.2|0.96 S_Transcript_66290:1-2997(+)
LSSPFLFLSLFPVSPLMPCTKPFTPPPSVPLSFSLFPSKKMGKKNKSKEGNKTEHCPATVFVSNLPYTFTNSQLEETFSDVGPIRRCFMVTKKGSTEHRGFGFVQFATAEDADRSIEMKNGSSVGGRKVVVKHAAHRAPLEQRRPKPNQADSNEIDKTTDEKEGAPQPAPVKHEKPPTEQQIVGKSIQPVKRSKKPSIGVADEGSASEKQRVARTVIFGGLLNSEMADEVLRRAKEVDGVCSVTYPLPKQELEHHGLAQDGCRMEAAAVLYASIRSARASVAALHQKEVNGGSVWARQLGGEGSKTQKWKLILRNLPFKAKINEIKEKFTAAGFVWDVFIPKNSETGMSKGFAFVKFTSKQDAENAILKFNGKKFGSRIIAVDWAVPKKIYTTGAHSAVEDVEHEDEDADSDDDDDASEDDGLDLEKKSEASDKYGFESDFADEEEEEDVSAVVNFDEELEIARRVLQNVITSSVKEASSLSKGSSLDRNGTNSDKSVDVSKKETTESAMLATQMKVESAQEEKQNESLSKNAENDLPRTVFISNLPFDLDNEEVKQRFASFGEVQSFFPVLHPITKRPRGTGFLKFATPSAADAAVSAANAAPGLGIFLKGRLLKVLKALDKKSAHDKAVEKSKNENQDQRNLYLAKEGLIVEGTPAAEGVSSDDLEKRQMLHQKKMTKLQSPNFHVSRTRLVIYNLPKSMTEKELRQLCVDAVTSKASKQKPLIRQIKFLNDVKKGKVKSLSRGVAFVEFADHQHAIVALRVLNNNPETFGPQHRPIVEFAIDNIQTLRKRSLKRNDQQLKTEDNLDDVQQNDDTSSSPTKSNKEKFRKRKSREDYRSTEGQEPGSETMKGNRTSAGVSTKENQGNKKKKWTAAREGNDQTTGNRNKVKKNRKEKKLNQDKSSQDKNVSYNDGKLKPLKETDKHPKKRKANDPSAEGQSPKKRRRNRNKEPVGKDAVDKLDILIAQYRSKFSQKKSDKSDGEKQGSKQQIRRWFQT*

Click here to download the sequence:
Link to NCBI Protein BLAST