Transcript Information: S_Transcript_66376.p1


Annotated TAIR IDAT3G24255.1
Annotated Gene NameRNA-directed DNA polymerase (reverse transcriptase)-related family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:8789471-8793208 | Forward length=746
E-Value9E-24
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.2553783700923
Replicate 24.0877757301994
Replicate 33.1830102885402
Condition 2: 8 Hour
Replicate 16.3867920239129
Replicate 27.0408863739241
Replicate 36.3298329182305
Condition 3: 24 Hour
Replicate 15.3226112058301
Replicate 25.0619680678136
Replicate 33.0727363742273


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66376.p1 GENE.S_Transcript_66376~~S_Transcript_66376.p1 ORF type:complete len:394 (+),score=41.52,RVT_1|PF00078.23|1.5e-19,zf-RVT|PF13966.2|4.1e+03,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|2.5e-06 S_Transcript_66376:1316-2497(+)
ATGATGGGTCTTGGTTTCCCTGATAACTTTGTTAGATGGATCAATGCTTGTGTCACTGCTACTAGTTTCCAACTCAGCATAAATGGCTCCTTACATGAACACTTCAGAGGTGGAAAGGGTATTAGACAGGGTGACCCCATATCACCCTTATTATTTGTAATGGTGATGGAATACCTGACTAGGATTTTGAAGCATAAAAGCACAGCTCCTGATTTCAGATATCACCCATTATGCAAATCTATTGGCCTTACTAGCCTTTGTTTTGCTGATGAGTTAATGATGTTTTGCAAGGCTGACATTAAGTCTATAAAGCATATTATGGATGGTTTTAATACCTTCTCTGAAGCTACTAGACTTGAGGCTAATTTGCATAAGTCTCATATTTATTTGGGAGGTGTTACAAACACTCTGAAACATGAGATTATCAGAGCCACTAGTTTTGCAGAAGGAATATTGCCTATGAAATACCTTGGTATGCCTTTATCTGCCACAAAATGGAACAAGGTTGAGTGCCAGTTCTTAATTGATCATATAATCAAAAGGATCAACTCCTGGGGCGGTAGGAATTTATCATTGGCTGGAAGGGCTCAACTCATCAAGTCTGTCCTGTATTCATTACATATCTACTGGGCTTCTATCTTTGTGATTCCTTCTAGTATTATTAAGCTTATTGAACATCATTGTAGAAGATTTTTATGGGACCAACATGCTGAATGTAAAAAGATACCTTTAGTGGCTTGGAAGAAGGTGTGTCTGCCCAAGAGTTATGGTGGTTTGAGTGTGACGAAATGCACTGTTTGGAATAAGGCTGCAATAGCTAAACATCTATGGGAAATCATGCAAAAGAAGGATTGTTTATGGGTGAAATGGGTCAATGGAATTTATCTCAAGGGGGCCTCCATATATCAATATACCTGCCCTGTTGATTGTGCTTGGTATTGGAAGAAAATCAGTAAACTTGCTCAACTTGCTGAATTTCAACCACACAACTGGCCTGTGAATGAAGAGGGGCAGTACACAATTACATTGGGCTATAAGCACTTGTTGGGAGATCAAGTTAAAGATAACCTTTCCAGAATCATTTGGGGAAAGTATAGTGTTCCAAAACATGCTATATATCTATGGTTGATAGCTCAAAACAGAATACTAACAAGGGATAGGCTATCACATATGCAGGTTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66376.p1 GENE.S_Transcript_66376~~S_Transcript_66376.p1 ORF type:complete len:394 (+),score=41.52,RVT_1|PF00078.23|1.5e-19,zf-RVT|PF13966.2|4.1e+03,zf-RVT|PF13966.2|1.6e+04,zf-RVT|PF13966.2|2.5e-06 S_Transcript_66376:1316-2497(+)
MMGLGFPDNFVRWINACVTATSFQLSINGSLHEHFRGGKGIRQGDPISPLLFVMVMEYLTRILKHKSTAPDFRYHPLCKSIGLTSLCFADELMMFCKADIKSIKHIMDGFNTFSEATRLEANLHKSHIYLGGVTNTLKHEIIRATSFAEGILPMKYLGMPLSATKWNKVECQFLIDHIIKRINSWGGRNLSLAGRAQLIKSVLYSLHIYWASIFVIPSSIIKLIEHHCRRFLWDQHAECKKIPLVAWKKVCLPKSYGGLSVTKCTVWNKAAIAKHLWEIMQKKDCLWVKWVNGIYLKGASIYQYTCPVDCAWYWKKISKLAQLAEFQPHNWPVNEEGQYTITLGYKHLLGDQVKDNLSRIIWGKYSVPKHAIYLWLIAQNRILTRDRLSHMQV*

Click here to download the sequence:
Link to NCBI Protein BLAST