Transcript Information: S_Transcript_66383.p1


Annotated TAIR IDAT5G15170.1
Annotated Gene Nametyrosyl-DNA phosphodiesterase-related
Annotated Gene Symbol(s)TDP1
Annotation TypeOrtholog
Chromosome Positionchr5:4926300-4929307 | Reverse length=605
E-Value6E-144
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.75766551559233
Replicate 20.94218318395081
Replicate 30.85322266578935
Condition 2: 8 Hour
Replicate 11.2901481686522
Replicate 21.7515326337152
Replicate 31.592999287205
Condition 3: 24 Hour
Replicate 11.788015374675
Replicate 21.5324285407495
Replicate 30.89758165142762


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66383.p1 GENE.S_Transcript_66383~~S_Transcript_66383.p1 ORF type:internal len:281 (+),score=52.78,Tyr-DNA_phospho|PF06087.8|1.3e-59 S_Transcript_66383:3-842(+)
GCGTTTGGTAGATCCAAAATTGACGCTTCCTTCTTTAAGAAGTTTGATTATGGAAATGCAGCGGTCAGATTGATTGCATCAGTTCCTGGATATCATTCAGGGTCGAATTTAAAGAAATGGGGTCATATGAAACTACGTTCCATTCTGGAGCGGTGTACTTTTGACAACGAATTTAAGAAATCGCCTCTTGCATATCAGTTTTCATCTCTTGGTTCTCTGGATGAGAAGTGGATGGCTGAACTAAGATCTTCAATGTCATCTGGTTTGTCAGCTGATAAGACGCCCTTGGGTTTAGGAGAGCCACTAATAATATGGCCTACAGTGGAAGATGTCAGATGGTCATTGGAGGGATATGCAGCTGGAAATGCCATCCCTAGTCCGGTAAAAAATGTCAAGAAGGAATTTTTGAAGAAGTACTGGGCAAAGTGGAAGGCCACCCACACTGGCCGATGCCGTGCAATGCCTCATATAAAGACATTTGTTCGCTATAATGGCCAAAATCTTGCTTGGTTCTTGCTTACATCAGCAAATCTCAGCAAAGCTGCCTGGGGAGCCCTTCAAAAGAACAATTCGCAGTTGATGATCCGTTCCTATGAGCTGGGTGTGCTGTTTTTGCCTACTGCTTTCAGAAACATTTGTGGATTCTCTTGTACAGATGATAAGTGTTCCATAAAGGATAAGAGGGGATCAGTGGATAATTCCAATCGAGAGGCAAAATTGGTAACCCTGAGATGGTCTGGAATAGAGAATGCAGATTCTGATTCTGAAATATTTCCACTTCCTGTTCCATATGAACTTCCGCCACAATTGTACTCTCCTCAAGATGTTCCATGGTCTTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66383.p1 GENE.S_Transcript_66383~~S_Transcript_66383.p1 ORF type:internal len:281 (+),score=52.78,Tyr-DNA_phospho|PF06087.8|1.3e-59 S_Transcript_66383:3-842(+)
AFGRSKIDASFFKKFDYGNAAVRLIASVPGYHSGSNLKKWGHMKLRSILERCTFDNEFKKSPLAYQFSSLGSLDEKWMAELRSSMSSGLSADKTPLGLGEPLIIWPTVEDVRWSLEGYAAGNAIPSPVKNVKKEFLKKYWAKWKATHTGRCRAMPHIKTFVRYNGQNLAWFLLTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPTAFRNICGFSCTDDKCSIKDKRGSVDNSNREAKLVTLRWSGIENADSDSEIFPLPVPYELPPQLYSPQDVPWSW

Click here to download the sequence:
Link to NCBI Protein BLAST