Transcript Information: S_Transcript_66386.p1


Annotated TAIR IDAT5G15170.1
Annotated Gene Nametyrosyl-DNA phosphodiesterase-related
Annotated Gene Symbol(s)TDP1
Annotation TypeOrtholog
Chromosome Positionchr5:4926300-4929307 | Reverse length=605
E-Value1.5E-128
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 19.0383777779858
Replicate 29.9906971581199
Replicate 310.160903653606
Condition 2: 8 Hour
Replicate 114.082804926409
Replicate 213.591953324513
Replicate 314.8808747431
Condition 3: 24 Hour
Replicate 111.458259642236
Replicate 211.973334417693
Replicate 39.041864975419


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66386.p1 GENE.S_Transcript_66386~~S_Transcript_66386.p1 ORF type:complete len:265 (+),score=48.67,Tyr-DNA_phospho|PF06087.8|2e-47 S_Transcript_66386:2247-3041(+)
ATGAAACTACGTTCCATTCTGGAGCGGTGTACTTTTGACAACGAATTTAAGAAATCGCCTCTTGCATATCAGTTTTCATCTCTTGGTTCTCTGGATGAGAAGTGGATGGCTGAACTAAGATCTTCAATGTCATCTGGCTTGTCGGCTGATAAGTCGCCCTTGGGTTTAGGAGAGCCATTGATAATATGGCCTACAGTGGAAGATGTCAGATGGTCATTGGAGGGATATGCAGCTGGAAATGCCATCCCTAGTCCGGTAAAAAATGTCAAGAAGGAATTTTTGAAGAAGTACTGGGCAAAGTGGAAGGCCACCCACACTGGCCGATGCCGTGCAATGCCTCATATAAAGACATTTGTTCGCTATAATGGCCAAAATCTTGCTTGGTTCTTGCTTACATCAGCAAATCTCAGCAAAGCTGCCTGGGGAGCCCTTCAAAAGAACAATTCGCAGTTGATGATCCGTTCCTATGAGCTGGGTGTGCTGTTTTTGCCTACTGCTTTCAGAAACATTTGTGGATTCTCTTGTACAGATGATAAGTGTTCCATAAAGGATAAGAGGGGATCAGTGGATAATTCCAATCGAGAGGCAAAATTGGTAACCCTGAGATGGTCTGGAATAGAGAATGCAGATTCTGATTCTGAAATATTTCCACTTCCTGTTCCATATGAACTTCCGCCACAATTGTACTCTCCTCAAGATGTTCCATGGTCTTGGGATTGTCAATACAGGCAAAAGGATGTTTATGGTCAAGTTTGGCCCAGACGGGTCAAACTCTATGCTACTCAGGACGCCTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66386.p1 GENE.S_Transcript_66386~~S_Transcript_66386.p1 ORF type:complete len:265 (+),score=48.67,Tyr-DNA_phospho|PF06087.8|2e-47 S_Transcript_66386:2247-3041(+)
MKLRSILERCTFDNEFKKSPLAYQFSSLGSLDEKWMAELRSSMSSGLSADKSPLGLGEPLIIWPTVEDVRWSLEGYAAGNAIPSPVKNVKKEFLKKYWAKWKATHTGRCRAMPHIKTFVRYNGQNLAWFLLTSANLSKAAWGALQKNNSQLMIRSYELGVLFLPTAFRNICGFSCTDDKCSIKDKRGSVDNSNREAKLVTLRWSGIENADSDSEIFPLPVPYELPPQLYSPQDVPWSWDCQYRQKDVYGQVWPRRVKLYATQDA*

Click here to download the sequence:
Link to NCBI Protein BLAST