Transcript Information: S_Transcript_66405.p1


Annotated TAIR IDAT2G39940.1
Annotated Gene NameRNI-like superfamily protein
Annotated Gene Symbol(s)COI1
Annotation TypeOrtholog
Chromosome Positionchr2:16672848-16675486 | Reverse length=592
E-Value1E-252
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 153.089057352513
Replicate 261.382237842691
Replicate 372.189234550217
Condition 2: 8 Hour
Replicate 186.32576526318
Replicate 290.676978277314
Replicate 375.64749347291
Condition 3: 24 Hour
Replicate 152.907333599861
Replicate 239.613077180614
Replicate 345.858262554757


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66405.p1 GENE.S_Transcript_66405~~S_Transcript_66405.p1 ORF type:complete len:583 (+),score=84.97 S_Transcript_66405:340-2088(+)
ATGGCGAATAATATAAGAACGATGTCAGAGGAAATACTAGAATGCATACTACCGTACATCCAAGATCCTAAAGACAGAGCATCGATTTCATCAGTATGTAGGAGCTGGTACGAGCTAGATCGTCTAACAAGACGCCACGTCACCATAGCACTATGTTACACAACAACGCCAGCGAGGCTACACGATAGGTTTCCGAACATAGAATCCTTGATAATGAAAGGAAAACCTAGGGCTGCTATGTTCAATTTGATACCAGAAAATTGGGGAGGTTATGTGCAGCCTTGGGTTAATATTCTAGGTTTATTTCCTCGTCTTCATTCGCTTCATTTTCGTCGTATGATTGTTACTGATTCAGATCTTGAGACTATTGCTGCCGTCAAAGGCCGTGTTCTTCGATCTTTGAAGCTTGATAAGTGTTCTGGTTTCTCTACTGATGGTCTTGAACATATCACCCGCTCTTGCAGGAGTATGCAGACACTGTTTTTGGAAGATAGTAACAGTATCGAGGAGAGAAGTGGCGAATGGTTTCACCAGCTGGCTTTGAACAATGTGGTTCTTGAAACACTGAATTTATACTTGACTTTTCTGGAAAAAATCAGAGTTGAAGATCTTGAACTTATTGCCAGAAATTGCCCTTTAGTCTCTCTCAAAATTGGTGATACTGACCTTGTCCATCTTGTGAATGTCTTCCGTTCAGCAACAACATTGCAAGAATTCGGTGGGGGCTCATTTAGTGAAGGATTTGATCAATATGCGAATATTTTATTTCCTCCCCAATTGACTTCTGTTGGTCTCATGTTCTTGGATAAAAGCCATGCGCCTATACTTTTTCCTATTGCACACAGTTTGAAGAAGCTGGATCTTGTTTATGCGTCACTTAGTGGTGAGGGCCACTGTGAGCTTATCCGTAGATGCCCCAATTTAGAAGTGCTAGAGACCACAAATGTAATAGGTGATCAGGGTATGGAGGTGGTATCAAAAACATGTAAGAGATTAAAGAGGCTACGTGTTGAACGAGGTGCAGATGATCAATTCATTGGTGATGAACCTGGTGCTGTTACGCAACAGGGATTGATAGCTGTGGCACAGGGTTGCCCTCTGCTGAATTACCTTGCTGTTTATGTGTCTGATATAACAAATGAAGCTCTAGAACATGTAGGTGCAAACTTGAAAAATCTCAACGACTTCCGACTTGTCTTGCTCGACACAGAGGAGACGATTACCGATTTGCCTCTGGACAATGGAGTTCGAGCTCTCCTACAAGGTTGTCAGAACATGCAAAGATTTGCATTGTATCTTAGACAGGGAGGCTTGACTGATGTGGGTCTCAGTTACATTGGGCAGTTCAGTCGAAATGTGAGGTGGATGCTTTTAGGTGTTGTTGGAGAAACTGATGCAGGACTACTGGAATTCTCTAGGGGCTGCCCTAGCCTAGAAAAACTTGAAATGAGGGCCTGTTGCTTTACAGAGCGTGCAATTGCTGTTGCTGCTACACGGCTTGCTTCTCTGAGGTACATATGGGTCCAAGGATACAGAGCATCACATATGGGTATGGTTGATCTCCTGGAAATGGCTCGCCCATTCTGGAACATAGAGCTTATTCCCGGGGACCAGTACAACGTCAATGGAGATAATGGCCAACCTGTAAGGGTTGATTATCCATCCCACATTGTAGCATATTACTCGCTTGCTGGACAGAGATCAGATCACCCAGAAACTGTCTACCCTTTGGCCTTACCTGAGCATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66405.p1 GENE.S_Transcript_66405~~S_Transcript_66405.p1 ORF type:complete len:583 (+),score=84.97 S_Transcript_66405:340-2088(+)
MANNIRTMSEEILECILPYIQDPKDRASISSVCRSWYELDRLTRRHVTIALCYTTTPARLHDRFPNIESLIMKGKPRAAMFNLIPENWGGYVQPWVNILGLFPRLHSLHFRRMIVTDSDLETIAAVKGRVLRSLKLDKCSGFSTDGLEHITRSCRSMQTLFLEDSNSIEERSGEWFHQLALNNVVLETLNLYLTFLEKIRVEDLELIARNCPLVSLKIGDTDLVHLVNVFRSATTLQEFGGGSFSEGFDQYANILFPPQLTSVGLMFLDKSHAPILFPIAHSLKKLDLVYASLSGEGHCELIRRCPNLEVLETTNVIGDQGMEVVSKTCKRLKRLRVERGADDQFIGDEPGAVTQQGLIAVAQGCPLLNYLAVYVSDITNEALEHVGANLKNLNDFRLVLLDTEETITDLPLDNGVRALLQGCQNMQRFALYLRQGGLTDVGLSYIGQFSRNVRWMLLGVVGETDAGLLEFSRGCPSLEKLEMRACCFTERAIAVAATRLASLRYIWVQGYRASHMGMVDLLEMARPFWNIELIPGDQYNVNGDNGQPVRVDYPSHIVAYYSLAGQRSDHPETVYPLALPEH*

Click here to download the sequence:
Link to NCBI Protein BLAST