Transcript Information: S_Transcript_66433.p2


Annotated TAIR IDAT5G05800.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11290.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:1743234-1744751 | Reverse length=449
E-Value2E-20
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9713334248282
Replicate 22.6557061504416
Replicate 31.5368946736334
Condition 2: 8 Hour
Replicate 12.3694878130148
Replicate 22.4857609599696
Replicate 32.9605343895807
Condition 3: 24 Hour
Replicate 12.0226743972772
Replicate 22.098501071884
Replicate 30.70061234458656


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66433.p2 GENE.S_Transcript_66433~~S_Transcript_66433.p2 ORF type:complete len:108 (+),score=20.86,Myb_DNA-bind_3|PF12776.3|2.5e-30,Myb_DNA-bind_4|PF13837.2|2.1e-06 S_Transcript_66433:130-453(+)
ATGTCTAAATTGGTAGTGAAGAAAGAGAAGGCCTGTTGGGATGATTTTACTACTAGGATTTTTTGTCAAGTGTGTGCCGAGCAAGTCCATTTGGGGAATAGACCTCATACACATTTTAACAAGGAAGGATGGAAGAATGTGATTAATAACTTTGCACTAAGGACAAACAAGAAGTATTCATATTTGCAGTTGAAAAATAAGTGGGATAAATTGAAAAACGAGTTTCAAGCATGGAAGAAAGTAGAGTCTCATACTGGTTTAGGGTGGAATCACGAGAAGAACACTATAGATGCTGATGATGCATGGTGGGCAACACAGGAGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66433.p2 GENE.S_Transcript_66433~~S_Transcript_66433.p2 ORF type:complete len:108 (+),score=20.86,Myb_DNA-bind_3|PF12776.3|2.5e-30,Myb_DNA-bind_4|PF13837.2|2.1e-06 S_Transcript_66433:130-453(+)
MSKLVVKKEKACWDDFTTRIFCQVCAEQVHLGNRPHTHFNKEGWKNVINNFALRTNKKYSYLQLKNKWDKLKNEFQAWKKVESHTGLGWNHEKNTIDADDAWWATQE*

Click here to download the sequence:
Link to NCBI Protein BLAST