Transcript Information: S_Transcript_66442.p1


Annotated TAIR IDAT5G27740.1
Annotated Gene NameATPase family associated with various cellular activities (AAA)
Annotated Gene Symbol(s)EMB161, EMB2775, EMB251, RFC3
Annotation TypeOrtholog
Chromosome Positionchr5:9823831-9826869 | Forward length=354
E-Value4.6E-229
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.544149019708
Replicate 28.9630082577404
Replicate 39.2693960003513
Condition 2: 8 Hour
Replicate 114.216926878089
Replicate 216.837146502294
Replicate 317.097086099829
Condition 3: 24 Hour
Replicate 16.9403015256575
Replicate 28.8530513970107
Replicate 39.3925842446136


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66442.p1 GENE.S_Transcript_66442~~S_Transcript_66442.p1 ORF type:5prime_partial len:384 (+),score=77.08,Rep_fac_C|PF08542.7|1.1e-16,DNA_pol3_delta2|PF13177.2|9e-11,AAA|PF00004.25|6.4e-08 S_Transcript_66442:3-1154(+)
CCATTCTCTACTCCTCTTTCTCTCCTCTCCCTCTCCCTCTCTCACTTCACTTCTCCCCTCTCTCGGTTCTGTTCGTCGACAATCGCCATGTTGTGGGTAGACAAGTACCGCCCCAAAACCCTAGACAAGGTTCTTGTTCATGAAGAAACTGCTCAGAATCTCAAGAAATTGGTAACGGAGCAAGATTGTCCACATTTGCTCTTTTATGGACCTCCCGGTTCTGGAAAGAAAGCCCTAATCATGGCGCTTCTTCGGGAGATGTTTGGCGCTAGTGCTGAAAAGGTTAGGGTGGAGAACAAAGCATGGAAAGTTGATGCTGGGACGAGGACAATTGATATAGAGATGACTACCCTATCAAGCACACACCATGTGGAGCTGAACCCCAGTGATGCAGGATTTCAAGATAGATATATTGTTCAAGAAATAATCAAAGAGATGGCTAGGAACAGACCTATTGATACCAAAGGAAAACGAGGATTCAAAGTGCTAGTACTAAATGAAGTCGACAAACTGTCCAAAGAAGCCCAACACTCATTGCGAAGAACAATGGAGAAGTATAGTGCATCCTGTCGGCTTATTCTCTGTTGCAATAGCTCATCAAGAGTTACTGAAGCAGTCCGATCCCGCTGTCTCAATGTGCGGATAAATGCTCCCACGGATGAGCAGATTGTCAAGGTTTTGGAGTTTGTAGGGAAGAAAGAAGGTTTGCAACTGCCCCCTGGATTTGCTGCTCGTGTGGCAGCAAAATCAAATAGGAGTCTGAGAAGAGCTATTCTACTACTTGAAACTTGCCGTGTCCAACAGTATCCTTTTACAAATAACCAGGTAATACCCCCTATGGACTGGGAGGAATATGTTTCTGAGATAGCATCTGATATTATGAAGGAGCAGAGCCCCAAAAGGCTCTTCCAGGTTCGAGGAAAGTTCTATGAGTTACTTACTAATTGCATTCCTCCTGAAGTCATACTGAAGAGACTTCTTTCGGAGCTATTGAAGAAATTAGATGCTGAATTAAAACATGAAGTTTGCCACTGGGATGCCTATTATGAACACCGGATGCGTCTTGGGCAGAAAGCCATATTCCACCTTGAAGCATTTGTGGCCAAATTTATGAGTATTTATAAGGGTTTCCTTATTGCAACTTTTGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66442.p1 GENE.S_Transcript_66442~~S_Transcript_66442.p1 ORF type:5prime_partial len:384 (+),score=77.08,Rep_fac_C|PF08542.7|1.1e-16,DNA_pol3_delta2|PF13177.2|9e-11,AAA|PF00004.25|6.4e-08 S_Transcript_66442:3-1154(+)
PFSTPLSLLSLSLSHFTSPLSRFCSSTIAMLWVDKYRPKTLDKVLVHEETAQNLKKLVTEQDCPHLLFYGPPGSGKKALIMALLREMFGASAEKVRVENKAWKVDAGTRTIDIEMTTLSSTHHVELNPSDAGFQDRYIVQEIIKEMARNRPIDTKGKRGFKVLVLNEVDKLSKEAQHSLRRTMEKYSASCRLILCCNSSSRVTEAVRSRCLNVRINAPTDEQIVKVLEFVGKKEGLQLPPGFAARVAAKSNRSLRRAILLLETCRVQQYPFTNNQVIPPMDWEEYVSEIASDIMKEQSPKRLFQVRGKFYELLTNCIPPEVILKRLLSELLKKLDAELKHEVCHWDAYYEHRMRLGQKAIFHLEAFVAKFMSIYKGFLIATFG*

Click here to download the sequence:
Link to NCBI Protein BLAST