Transcript Information: S_Transcript_66589.p1


Annotated TAIR IDAT3G01810.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: nucleolar protein gar2-related (TAIR:AT2G42320.2); Has 1327 Blast hits to 470 proteins in 132 species: Archae - 2; Bacteria - 131; Metazoa - 139; Fungi - 114; Plants - 114; Viruses - 0; Other Eukaryotes - 827 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:289218-292557 | Forward length=921
E-Value1E-151
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.1820495472479
Replicate 20.95194777278617
Replicate 31.0297974462924
Condition 2: 8 Hour
Replicate 11.0554444446297
Replicate 21.7886122643436
Replicate 31.1631744251449
Condition 3: 24 Hour
Replicate 11.0534334678205
Replicate 21.6106262033953
Replicate 31.1202684697704


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66589.p1 GENE.S_Transcript_66589~~S_Transcript_66589.p1 ORF type:3prime_partial len:788 (+),score=167.53,NT-C2|PF10358.5|9.5e-10 S_Transcript_66589:193-2553(+)
ATGGTTTTAGGTCTTAGGGCCAAAACTAGAAGGGGTCCCAATGTTCAGGTTGAGTACCTCATCCATGTTCAGGAAATCAAGCCTTGGCCACCTACAAAATCATTGAAAAATCTTCGCTCGGTCTTGATCCAATGGGAAAATGGGGATCGCAATTCTGGTTCTACTAGCTCCGTGGCTCCTTCTGTTGATGATGGAAAAATCGAGTTCAATGAGTCTTTTAAGCTTCCTGCTGTTTTGTCAAGGGATATGTCTGTCAAAAATGGGGATGTGGATGTGTTTCATAAAAACTTGCTGGAGTTCAACTTGTATGAGCCTCGAAGGGATAAGACGTTAAAAGGACAGTTGCTTGGGACAGCCATTGTAGACTTAGCTGACTATGTTGTGATTAACGAAATTACCAATGTAAGTGTTCCCATGAACTGTACGAGGAGCTTCAGGAACACTGCCCAGCCCATTTTGTACCTTAGAATCCAGTCCTATGATAAGGTTCGCTCGAACTCATCATTAAGGGGCAGATTGGCAAAAGAAGCATCCTTGGACAAAAATGGTGGAGACTCAGTTTCAGCTCTGATGAGTGAGGAGTATGCTGATGAAACCGAGGTTGCTTCCTTGGCTGATGACGATGTTTCATCGCACTCCTCGTTGACTGCCTCATCTGCTCATGCATCTAGTGGAGGTTCACCTTCACATAACAAGGAGATTGGCACAGGCAGGGGAAAAGACCTTACAGAGATGGGAACAGACAAACAAGAACTGGACCTAAAGCTGGCTCATCAAAGATCAGATACCAAGATAGTCAAGGAATCAAATGACAATTCGAAGGATGGCTCTTCACTTGGTGCCTCTGTAGAAGTTTCTTCTGATCATAGGAGCCCAAATAATGCACCTGCTTCTTTATCTGACAACTCTGACTTAGAGTCTGAGTCAAATTCAGCAAAATCTTTTGCCTCTGGTCCAGTGAATGTGTCTGGTAATCAAGATACTGAAAGCGATGCTCCAGCTTTGAATCGCAATAGATTCAAACAAGTTAAATCAGTTCGATCCCCGATGGATTCTGCCCGGAGCAATGGCCTTCCAGGTGGTGGTTCTGGAGCTCCCGTGAAGCATGAAGCTAAGATTTATCCAGTAGATAAAGGTAGTGCCTCAGCTAACACTAAAGCTCAAGAGCTCGAACAAAGAATAAAGATGCTAGAGGGAGAATTGAGAGAAGCTGCTGGTATTGAGGTCTCACTATATTCAGTAGTTGCAGAGCATGGTAGCTCTGTAAATAAGGTTCATGCCCCGGCAAGGCGGCTTTCTAGACTGTATTTGCAAGCAAGCAAAGGAATAAGGAGAGCCAGTGCAGCGCAAAGTGCAGTTTCAGGACTGGTTGTGGTGGCAAAAGCTTGTGGAAATGATGTCCCTCGGTTAACCTTTTGGTTGTCAAACTGCATTGTTCTCCGAGCAATTGTTAGTGAGGCATTCGTGAATGAGCTGTTGCCGATATCTGCTGGAACTTCATCTGAACATAGTGGGGCCAAGGGAATGAGCAAGAAACCAGCATCACTGAAGTGGAAAGTTTCATCTTCTGAAAAGAAAGGAACGAAAGATTTTTTGGGTAGAGGTGTTGAAGATTTGGAAGATCCACATGCATTTATATCTGCATTGGAAAAAGTTGAATCTTGGATCTTTTCACGAATTATCGAATCTGTTTGGTGGCAGACTTTGACTCCACATATGCAATCTTCAGCTGCCAAGGCAATAGATAAAGTGGTTGATTCTGGCACTAAAAGAAGCTATAAGAGGACATCCAGTTCTGCTGATCAAGGGCAGGTGAATTTCTCATTAGAGCTTTGGAAGAAGGCATTCAAGGATGCCTGTGAAAGGCTCTGTCCTGTCCGAGCTGGAGGTCATGAGTGTGGCTGTTTGCCAGTTCTGTCTAAATTGGTTAGTTTGATGAGCTTGAATTCTAAGTTTATGAGTGTGCATTTCATGAGCCTTCAATTTGGATATCCAGATAAGCATCTCACATTCCTTTGGGCTGTTACACAAGTAGGTGCTTTAGATGCTCCTTCTCAAGCCTCTAAGAACAAAATGTTTCAATTTCACACTCTTCATATTGATGTGAAGTTCATGATCGACTGTTCGAAGCTACATGCAGAGATCAATAATCAGGCCAATGGTGGGCTTGACACTGAATGTTTAGCTGATCCTCACAGTTTACACAAAGTGCCACACATCCTTTTTATGCTGGTGAACCCTTGTCACCAAATATTACTTTTTCATCATGTTCACTATACAAAAACAAAACAAACAACTAAGATAATGGTGATAGCAGAAGATCTAGAGAACCAACTGATTTTTTTTTTTTTTTTTTTTTGG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66589.p1 GENE.S_Transcript_66589~~S_Transcript_66589.p1 ORF type:3prime_partial len:788 (+),score=167.53,NT-C2|PF10358.5|9.5e-10 S_Transcript_66589:193-2553(+)
MVLGLRAKTRRGPNVQVEYLIHVQEIKPWPPTKSLKNLRSVLIQWENGDRNSGSTSSVAPSVDDGKIEFNESFKLPAVLSRDMSVKNGDVDVFHKNLLEFNLYEPRRDKTLKGQLLGTAIVDLADYVVINEITNVSVPMNCTRSFRNTAQPILYLRIQSYDKVRSNSSLRGRLAKEASLDKNGGDSVSALMSEEYADETEVASLADDDVSSHSSLTASSAHASSGGSPSHNKEIGTGRGKDLTEMGTDKQELDLKLAHQRSDTKIVKESNDNSKDGSSLGASVEVSSDHRSPNNAPASLSDNSDLESESNSAKSFASGPVNVSGNQDTESDAPALNRNRFKQVKSVRSPMDSARSNGLPGGGSGAPVKHEAKIYPVDKGSASANTKAQELEQRIKMLEGELREAAGIEVSLYSVVAEHGSSVNKVHAPARRLSRLYLQASKGIRRASAAQSAVSGLVVVAKACGNDVPRLTFWLSNCIVLRAIVSEAFVNELLPISAGTSSEHSGAKGMSKKPASLKWKVSSSEKKGTKDFLGRGVEDLEDPHAFISALEKVESWIFSRIIESVWWQTLTPHMQSSAAKAIDKVVDSGTKRSYKRTSSSADQGQVNFSLELWKKAFKDACERLCPVRAGGHECGCLPVLSKLVSLMSLNSKFMSVHFMSLQFGYPDKHLTFLWAVTQVGALDAPSQASKNKMFQFHTLHIDVKFMIDCSKLHAEINNQANGGLDTECLADPHSLHKVPHILFMLVNPCHQILLFHHVHYTKTKQTTKIMVIAEDLENQLIFFFFFFW

Click here to download the sequence:
Link to NCBI Protein BLAST