Transcript Information: S_Transcript_66834.p1


Annotated TAIR IDAT5G15010.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:4857241-4858959 | Forward length=572
E-Value7.9E-192
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.8785476978503
Replicate 27.5947640473373
Replicate 38.6341208515307
Condition 2: 8 Hour
Replicate 19.8001363419527
Replicate 210.666096511539
Replicate 39.685686347186
Condition 3: 24 Hour
Replicate 110.678049761323
Replicate 28.6598385024942
Replicate 37.3365327099219


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66834.p1 GENE.S_Transcript_66834~~S_Transcript_66834.p1 ORF type:complete len:581 (+),score=119.76,PPR_2|PF13041.2|0.0002,PPR_2|PF13041.2|30,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|8e-07,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|4.8e-12,PPR_2|PF13041.2|2.1e-12,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|0.00046,PPR_2|PF13041.2|2.3e-08,PPR|PF01535.16|0.0025,PPR|PF01535.16|22,PPR|PF01535.16|6.1e+02,PPR|PF01535.16|88,PPR|PF01535.16|9e-06,PPR|PF01535.16|0.0076,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|66,PPR|PF01535.16|0.0077,PPR|PF01535.16|1.1e-05,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|17,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|0.7,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.32,PPR_1|PF12854.3|31,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|13,PPR_1|PF12854.3|8.2e-05,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|9e-11,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|0.05,PPR_1|PF12854.3|0.0021,ECSIT|PF06239.7|0.91,ECSIT|PF06239.7|0.0081,ECSIT|PF06239.7|2.2e+03 S_Transcript_66834:510-2252(+)
ATGATAGGTGCCGACCTAAAACCTACCACTGAAAATCTCAAACATCCATTTCGTTATGATCGTCAAACTCCAGTCTTCTACTCCACTATCTTGGCTAATTCGAACCAAGATGCCCCCCCGTTAACCGATTTGATCAGTGTTAGTGATGCCAATGATTGCGAGGATAGTAGATATGATGATCTTAGTGGGGAAGATGATGAGATTGAATCTGGGCATTTGGGTCTCAAGGATGAGAAATTTAATCATGATGCTGGGGTGATTTTGGAAATCTTGAGGGGAATAGGGAGCAAGAACAATCCATCTGAGGAAGAGCGACCCCCTGATAAACCGGCGGTGATAAGTGGTGTTGAAGTGACAAACAAGCTTAACCAATGTGGTATCACTCTGACTAAAGAGCTGGTGGTGGAAGTCCTTTCAAGAACCAGAAATGACTGGGAGGTGGCATATACATTTTTCCTTTGGGTGGGAAAGCAGCCAGCATATGCACACTCAGTGAGGGAGTACCATTCAATGGTTTCCATCCTGGCCAAGAGGAGGAAATTTGACACTGCCTGGTCTTTGATTGATGAAATGAGAAAGGGTGGCGTTGTGAAGCCTACTACACTCTTGATCATGATTAGAAGGTATTGTGCAGCTCATGACATTGCTGGTGCTTTAAACACTTTCCATGCCTTCAAACGGTTTGGTTTTCCTGTTGGCATGGAGGAATTTCACAAGCTTCTTTCTGCACTTGCTCGGTATAAGAATGTGCAGGATGCTGAGCATTTACTCTTCAGTAACAAAAACACTTTTCCATTTAACACTAAGAGCTTTAACATCATATTGAATGGATGGTGCAATGTCATTGGTAGCCCTCGAGAGGCAAACAGATTCTGGAGGTTGATGATTGATCTGGGAATTAAGCTTGATGTTATTTCATATTCAAGCATAATTTCAAGCTACTCAAAGTCAAATAAGATTAAAGCAGTGCTCAGATTGTTTAACAAGATGAATGAAATGGGCATTGATCCAGATAGGAAAGTTTATAATGCTGTTATGCATGCACTTGCAAAGGGAGATCGTGTAAAAGAAGCCTTGAATCTTCTGGGAACCGTGAAAGGTAAGGGCATCGCTCCAAATGCTGTCACTTATAACTCACTGATTAAGCCATTATGTAAAGCACGGAAAAGGGATGAAGCTGAGATGCTCTTTGATGAGATGTTGAGGCATGGTTTGCGGCCTACTACTCGGACTTTCCATGCTTTCTTGCATATCCAGAGAACGGATGACGGTGTGTTTGCATTATTGGATAAAATGAAAGAGTTGGGTTGTTACCCAAACAAAGATACTTATCTATTGTTAATCAGGAAGTTCTGCAGATGGTGTCAGCTAGATAATGTGTTTAAGTTGTGGGATCAGATGACAGAGAATGGGTGGAATGACGATGAAGCTTCATATATAGCCTTGATTCATGGGCTATTTTTGAACGGGAAGCTGGAAGAAGCACACAAAATCTACTCAGAGATGAAGGAAAGATCATTGGTGCCAGATGCAAAAACAGATGAACTTATCCAAACCTGGTTGTCTAATAAACAAATGGCAGAGTCTCCTATGATAAATTCAGAAAATGGTTCGATGGATATTGGTATTGTCTCTAGGAAGGCCGGAGACTCCAGAACTAAGTTTCATCAAGAAGGAGATGCTAGAGAACAACCAGAATTCAGAAAAGTTGTAAAAGAGCGAGGTTTTTCTTTTTGGAAGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66834.p1 GENE.S_Transcript_66834~~S_Transcript_66834.p1 ORF type:complete len:581 (+),score=119.76,PPR_2|PF13041.2|0.0002,PPR_2|PF13041.2|30,PPR_2|PF13041.2|2.1e+03,PPR_2|PF13041.2|8e-07,PPR_2|PF13041.2|1.1e-10,PPR_2|PF13041.2|4.8e-12,PPR_2|PF13041.2|2.1e-12,PPR_2|PF13041.2|3.6e-05,PPR_2|PF13041.2|0.00046,PPR_2|PF13041.2|2.3e-08,PPR|PF01535.16|0.0025,PPR|PF01535.16|22,PPR|PF01535.16|6.1e+02,PPR|PF01535.16|88,PPR|PF01535.16|9e-06,PPR|PF01535.16|0.0076,PPR|PF01535.16|1.3e-06,PPR|PF01535.16|66,PPR|PF01535.16|0.0077,PPR|PF01535.16|1.1e-05,PPR_3|PF13812.2|0.039,PPR_3|PF13812.2|17,PPR_3|PF13812.2|1.6e+02,PPR_3|PF13812.2|0.7,PPR_3|PF13812.2|0.041,PPR_3|PF13812.2|0.15,PPR_3|PF13812.2|0.00012,PPR_3|PF13812.2|4.1,PPR_3|PF13812.2|0.16,PPR_3|PF13812.2|0.32,PPR_1|PF12854.3|31,PPR_1|PF12854.3|2.6e+03,PPR_1|PF12854.3|1.7e+03,PPR_1|PF12854.3|13,PPR_1|PF12854.3|8.2e-05,PPR_1|PF12854.3|0.055,PPR_1|PF12854.3|9e-11,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|4e+03,PPR_1|PF12854.3|0.05,PPR_1|PF12854.3|0.0021,ECSIT|PF06239.7|0.91,ECSIT|PF06239.7|0.0081,ECSIT|PF06239.7|2.2e+03 S_Transcript_66834:510-2252(+)
MIGADLKPTTENLKHPFRYDRQTPVFYSTILANSNQDAPPLTDLISVSDANDCEDSRYDDLSGEDDEIESGHLGLKDEKFNHDAGVILEILRGIGSKNNPSEEERPPDKPAVISGVEVTNKLNQCGITLTKELVVEVLSRTRNDWEVAYTFFLWVGKQPAYAHSVREYHSMVSILAKRRKFDTAWSLIDEMRKGGVVKPTTLLIMIRRYCAAHDIAGALNTFHAFKRFGFPVGMEEFHKLLSALARYKNVQDAEHLLFSNKNTFPFNTKSFNIILNGWCNVIGSPREANRFWRLMIDLGIKLDVISYSSIISSYSKSNKIKAVLRLFNKMNEMGIDPDRKVYNAVMHALAKGDRVKEALNLLGTVKGKGIAPNAVTYNSLIKPLCKARKRDEAEMLFDEMLRHGLRPTTRTFHAFLHIQRTDDGVFALLDKMKELGCYPNKDTYLLLIRKFCRWCQLDNVFKLWDQMTENGWNDDEASYIALIHGLFLNGKLEEAHKIYSEMKERSLVPDAKTDELIQTWLSNKQMAESPMINSENGSMDIGIVSRKAGDSRTKFHQEGDAREQPEFRKVVKERGFSFWK*

Click here to download the sequence:
Link to NCBI Protein BLAST