Transcript Information: S_Transcript_66876.p1


Annotated TAIR IDAT3G53360.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:19784502-19786808 | Forward length=768
E-Value3.4E-296
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.162039075384
Replicate 213.452920461899
Replicate 313.707758911945
Condition 2: 8 Hour
Replicate 115.932448221529
Replicate 216.714269458692
Replicate 315.980044931077
Condition 3: 24 Hour
Replicate 115.170836929925
Replicate 213.586649558606
Replicate 313.889932027978


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66876.p1 GENE.S_Transcript_66876~~S_Transcript_66876.p1 ORF type:complete len:779 (+),score=110.77,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|2.1e-07,PPR_2|PF13041.2|13,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|5.9e-09,PPR_2|PF13041.2|0.19,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|5.4e-11,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|3,PPR_2|PF13041.2|4.2e+02,PPR_2|PF13041.2|9.6e+02,PPR|PF01535.16|0.25,PPR|PF01535.16|3.1e+03,PPR|PF01535.16|0.026,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|0.56,PPR|PF01535.16|0.0026,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|2.3,PPR|PF01535.16|0.00075,PPR|PF01535.16|0.29,PPR|PF01535.16|20,PPR|PF01535.16|25,PPR|PF01535.16|3e-08,PPR|PF01535.16|5.9,PPR|PF01535.16|0.27,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|3.9e+02,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|11,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|0.064,PPR_3|PF13812.2|23,PPR_3|PF13812.2|18,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|8.4e+02,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|11,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|9.4e+03,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|0.82,PPR_1|PF12854.3|3.4e+02,PPR_1|PF12854.3|4.9e+03,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|70,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|0.00095,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|1.6e+02,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.1e+03,TPR_14|PF13428.2|0.25,TPR_14|PF13428.2|13,TPR_14|PF13428.2|1.4e+02,TPR_19|PF14559.2|52,TPR_19|PF14559.2|6.8e+03,TPR_19|PF14559.2|72,TPR_19|PF14559.2|1.5e+02,TPR_19|PF14559.2|3.5 S_Transcript_66876:499-2835(+)
ATGCTGAGAAAAGTGAAACCCAGGATACCATTTTTTAGTCAGGATGCATGGCCTAGCATCCAGCTTCTTCAAGTATCCAACTCTGGATCTGAGCAGGCCCGGAATGATTACATAAGCTCCCTCTGTAAGAAAAAACGATTCAGAGAAGCTCTTGAGGCCTTTGATTTGTTACTGGGAAAAAATAACTTCAAGATAAATCATAGCACATATGCTCTTCTCTTCTCTGCTTGCTCCTCTCTCAGAGCCTTAGAATATGGTAAGAAGGTTCATACCCATCTTCTCAGGAACAACTGTATGCCAGATGTTATTCTTCAGAACCACTTAATCAACATGTATGGTAAATGCAGATCCGTGAAAGATGCCCGTGAGGTTTTTGATGCCATGTATGATAGGAATTCAGTGTCTTGGACATCATTGATAGCTGGATACTCTCAAAATCAACAAGAAGGCACTGCAATGGAACTTTTCTTTGAAATGCTATGTTCTGGATTCATACCTGACCAATATACTCTTGCAAGCATCATAAAGGCTTGCACGAGTGTTGGTGATGTCAATTTGGGAAGACAACTACATGCTCATGTACTTAAATTGAATTCCCATTCCTCTCTCATTGCACATAATGCTCTGATTTCCATGTATACAAAGTTTGAACAAATAATTGAAGCATCAACTGTGTTTTCACGGATTTCAAGCAAGGATCTGACATCATGGGGTTCAATGATATCTGGGTTGTCACAACTTGGTTATGAAATGGAATCTTTGCATTGTTTTAAAGAAATGCTCCATAGTGTTTCCTTCCAGCCCAATGAATTCATCTTTGGCAGCATTATTAATTCTTGTAGCAGTCTTCTCGAGCCTGATTGTGGAAGACAGATACATGGGGTTTGTATCAAAAGTGGATTCGGGGATGATATGTTTGTTGGATGCTCTCTTACTGACATGTATGCAAAGTGTGGTTTTCTAGATTCTGCTAACGATATGTTTAACAAAATAATATGTCCTGATATAGTTTCCTGGAATGCAATTATTACTGGGCTTGCTTATGGTGGAAATGACAGTGAAGCATTGACATTTTTCCATAGGATGAGGTCTGTAGGGCTGTCTCCAGATGAAATAACAGTTCGATCTTTACTCTGTGCCTGCACTAGTCCGTCAGTAATTATTACAGGGGAGCAGTTTCACTCCTATATTATCAAGACGGGCTTGAATGTTAATATTTCTGTGTGCAACACTCTGCTGACAATGTATATGAAGTGTTCTTCTCTGGATGACGTTTATAATATGTTCAAAGAGTTCAAAAGGAAAGCAGATTTGATTTCTTGGAACCTACTTGTCACAGCATGCTTGCTACACTGTCAGGCTGAGCAGGTTTTCTGCCATTTCAATGAGATGAGTATTTATAATCATAAGCCTGATTATATTGCATTAACTAATCTGCTAAAAGCTTGTTCTCAAATGACCTCTCTAGATATAGGCAAACAAGTGCATGCCTATGCACTAAAAGTTGGGCTTGAGCTTGACTTTTGTGTTACAAATGGATTACTTGACCTGTACGCGAAGTGCGGTGCACTCAGAAGTGCTCGCATTCTGTTTGACTCTATTGGAAGTACCAACACTGTCCTGTGGAGTACACTGATTCTTGGATATGCTCAGTCCGGAGACGGAGAGGAAGCTCTTAAACTCTTTAAGAGAATGATTAGTCTAGGCGTTCAGCCAAATGAAGTTACATTTATCGGGGTGTTGACTGCTTGTAGTCACATTGGGCTGGTTGAAGAAGGATGGCAATATTACAAGACCATGGAAATGAGGCACGGAATAGTTCCAACAAGAGAACATTGTTCGTGTTTGATTGATATGCTTGCCCGTGCTGGACAGTTAAGGGAAGCTGAGGCTTTTATTCGACAATTAACTTTGGAGCCTGACATTGTGGTATGGAAGACATTGCTTTCTGCCTGTAGAACCTATGGAGATGTCCGAATCGGGAAATGGGCAGCAGAAAACGTATTGAAACTTGATCCCTTTAATTCTACTGCATATGTTCTTCTTTGTAATATATATGCTGGTGAAGGAAACTGGGAAGATTTTGCCAGAATGAGAAGCTTGATGAAAAGTAATGGTGTGAGGAAAGTCCCTGGTCAGAGTTGGATTGAAGTCCAGAATAAGATTTGTGTTTTTTCTGTGAAAGATGTTACGCATGCGGAAACAAGTAATATATATTCCGCATTGGAGTATCTGTACTTGGAGATGCTGGATGCCGGCTATCTATCTGGGAAAGGGAGCTTGTTCAAAAGTTTGCACCAGGGACTGAAAGAAGAAGAAAGCTGTTCAGAATATTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66876.p1 GENE.S_Transcript_66876~~S_Transcript_66876.p1 ORF type:complete len:779 (+),score=110.77,PPR_2|PF13041.2|0.0001,PPR_2|PF13041.2|0.0018,PPR_2|PF13041.2|2.1e-07,PPR_2|PF13041.2|13,PPR_2|PF13041.2|0.066,PPR_2|PF13041.2|1.1e+03,PPR_2|PF13041.2|5.9e-09,PPR_2|PF13041.2|0.19,PPR_2|PF13041.2|0.029,PPR_2|PF13041.2|1.8e+02,PPR_2|PF13041.2|5.4e-11,PPR_2|PF13041.2|0.18,PPR_2|PF13041.2|3,PPR_2|PF13041.2|4.2e+02,PPR_2|PF13041.2|9.6e+02,PPR|PF01535.16|0.25,PPR|PF01535.16|3.1e+03,PPR|PF01535.16|0.026,PPR|PF01535.16|2.7e-05,PPR|PF01535.16|2.8e+03,PPR|PF01535.16|0.56,PPR|PF01535.16|0.0026,PPR|PF01535.16|1.7e+03,PPR|PF01535.16|2.3,PPR|PF01535.16|0.00075,PPR|PF01535.16|0.29,PPR|PF01535.16|20,PPR|PF01535.16|25,PPR|PF01535.16|3e-08,PPR|PF01535.16|5.9,PPR|PF01535.16|0.27,PPR|PF01535.16|2.5e+03,PPR|PF01535.16|3.9e+02,PPR_3|PF13812.2|2.1e+03,PPR_3|PF13812.2|1.6e+04,PPR_3|PF13812.2|0.6,PPR_3|PF13812.2|11,PPR_3|PF13812.2|3.8,PPR_3|PF13812.2|7.5e+03,PPR_3|PF13812.2|6.5e+03,PPR_3|PF13812.2|0.064,PPR_3|PF13812.2|23,PPR_3|PF13812.2|18,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|8.4e+02,PPR_3|PF13812.2|1.2e-05,PPR_3|PF13812.2|8.7,PPR_3|PF13812.2|11,PPR_3|PF13812.2|1.1e+03,PPR_3|PF13812.2|9.4e+03,PPR_1|PF12854.3|1.2,PPR_1|PF12854.3|0.0018,PPR_1|PF12854.3|0.82,PPR_1|PF12854.3|3.4e+02,PPR_1|PF12854.3|4.9e+03,PPR_1|PF12854.3|2.6e+02,PPR_1|PF12854.3|2.5e+02,PPR_1|PF12854.3|0.018,PPR_1|PF12854.3|1.1e+03,PPR_1|PF12854.3|70,PPR_1|PF12854.3|4.1e+03,PPR_1|PF12854.3|0.00095,PPR_1|PF12854.3|1.7e+02,PPR_1|PF12854.3|0.064,PPR_1|PF12854.3|1.6e+02,TPR_14|PF13428.2|1.3e+04,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.6e+04,TPR_14|PF13428.2|1.1e+03,TPR_14|PF13428.2|0.25,TPR_14|PF13428.2|13,TPR_14|PF13428.2|1.4e+02,TPR_19|PF14559.2|52,TPR_19|PF14559.2|6.8e+03,TPR_19|PF14559.2|72,TPR_19|PF14559.2|1.5e+02,TPR_19|PF14559.2|3.5 S_Transcript_66876:499-2835(+)
MLRKVKPRIPFFSQDAWPSIQLLQVSNSGSEQARNDYISSLCKKKRFREALEAFDLLLGKNNFKINHSTYALLFSACSSLRALEYGKKVHTHLLRNNCMPDVILQNHLINMYGKCRSVKDAREVFDAMYDRNSVSWTSLIAGYSQNQQEGTAMELFFEMLCSGFIPDQYTLASIIKACTSVGDVNLGRQLHAHVLKLNSHSSLIAHNALISMYTKFEQIIEASTVFSRISSKDLTSWGSMISGLSQLGYEMESLHCFKEMLHSVSFQPNEFIFGSIINSCSSLLEPDCGRQIHGVCIKSGFGDDMFVGCSLTDMYAKCGFLDSANDMFNKIICPDIVSWNAIITGLAYGGNDSEALTFFHRMRSVGLSPDEITVRSLLCACTSPSVIITGEQFHSYIIKTGLNVNISVCNTLLTMYMKCSSLDDVYNMFKEFKRKADLISWNLLVTACLLHCQAEQVFCHFNEMSIYNHKPDYIALTNLLKACSQMTSLDIGKQVHAYALKVGLELDFCVTNGLLDLYAKCGALRSARILFDSIGSTNTVLWSTLILGYAQSGDGEEALKLFKRMISLGVQPNEVTFIGVLTACSHIGLVEEGWQYYKTMEMRHGIVPTREHCSCLIDMLARAGQLREAEAFIRQLTLEPDIVVWKTLLSACRTYGDVRIGKWAAENVLKLDPFNSTAYVLLCNIYAGEGNWEDFARMRSLMKSNGVRKVPGQSWIEVQNKICVFSVKDVTHAETSNIYSALEYLYLEMLDAGYLSGKGSLFKSLHQGLKEEESCSEY*

Click here to download the sequence:
Link to NCBI Protein BLAST