Transcript Information: S_Transcript_66893.p2


Annotated TAIR ID
Annotated Gene Name
Annotated Gene Symbol(s)
Annotation Type
Chromosome Position
E-Value
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.9560466180949
Replicate 22.76714690337
Replicate 33.2582581617689
Condition 2: 8 Hour
Replicate 13.0053989051118
Replicate 23.2132189887133
Replicate 33.4352579754488
Condition 3: 24 Hour
Replicate 13.7856608611482
Replicate 22.7661159105319
Replicate 32.6021394430093


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_66893.p2 GENE.S_Transcript_66893~~S_Transcript_66893.p2 ORF type:5prime_partial len:1483 (+),score=286.97,SMG1|PF15785.1|5.1e-42 S_Transcript_66893:1-4449(+)
CTTCACCATCAACAGCAGCAACTCGCCGCTCTTCTCTCCGTCGCTCTCGCCAAAGACGACAGCTCCTCCTCCACCACCACCACCACCACCGCAACCACCTCCACAACAACCTCCGCCACGTCACCGACGCAAGAAGCTGACGAGTCGAAACGACTCGGCGCAATCAACTCGATACACCGGCTCATTGTTTACCCTCCGAACTCCGTCATCGTTGCTCACTCTTCTGCTTTTCTCTTTCAAGGCCTCTCCCAGCTTCTTGCCGATAAATCGTATTCAGTACGTTTCTCGGCGGCCACTGCATATGGAGCTTTGTGTTCTGTGTTGTGTTCAATCCCATTAGGATCGAATGGAAGACAAAACCATGTTGTTACTTTGGTTGACAATTTTATGAATTGGGCTATGCCTTTGCTTAATAATGTCAGTGCTAATAATGGGTCAACAGAGCTGGCTTTGGAAAGTCTCCGTGAGTTCCTTAGTGTTGGGGATGTAGGGGCCATAGAAAGCTATGCTTTTCCAATACTCAAAGCATGTCAACAATTGCTCGAGGATGAGAGGACCTCCTTGAATCTGTTACATCAGCTTTTGGGCGTTCTTACTATGATATCATTGAAGTTTTTTAGATGCTTCCAGCCACACTTTATTGATCTTGTTGACTTGCTTCTCGGATGGGCGATGATGCCTGACCTTTCTGAATCTGATAGACGAGTTATCATGGATAGCTTCTTGCAGTTCCAGAAGTATTGGGTGAGTAATCTTCAGTTCCCTTTGGGTTTGTTGATGAAATTTCTGGGTGATATGGATATGCTGCTTCAAGATGTAAATCCTGGGACTCCACAGCAATTCCGGAGACTGCTTGCACTTTTTTCTTGCTTTTCTACAGTACTACGATCCACAGCGTCAGGACTGCTAGAAATTAATCTACTTGAACAGATAATTGAGCCTCTGAGCACAATGATACCCCAGTTACTAGGGTGCTTGTCTTTGCTGGGAAAGAAATTCGGGTGGTCAAAATGGGTTGAGGATTCTTGGAAGTGTCTGACTCTCTTGGCTGAAATATTGGGTGAAAAGTTTTCTATTTTTTATCCACTTGCTCTAGATGTCTTGTTTCAAAGTTTGAATGTAGATGCCCGTATAAAATCAGCAGGAGATGGGAAAATTACTTCTTTTCAAATTCATGGGGTTCTCAAAACAAATCTTCAGCTTCTGTCCCTGCAAAAGCTTGGGCTTCTTCCATCTTCTGTTAGTAAGATTTTGAAATGGGATGCTCCAATAGCTCAGCTACGATTACATCCTAATCACTTAGTGACAGCCAGTGCCGCTGCAACATATGTTTTCTTGCTTCAACATGGGAATGGTGAAGTTGTTGAACATTCTATCAATTTTTTGTTTGAAGAGCTATCTTTGTTGAAGAACATGTTGGAAAAAGTCCTTGCCAGTGGAGAAAGGGATATCAGCCTTGTCACCCACAATTCATATTCAAGGTTGGAACTCTTTGCGCTGTTTAAATTTGATCTGAAAGTCTTACTAAGCTGCATTCACTTGGGAAAGACTGATAGTTTGACAAGCCTGCCTGACATGGCCAGTTTGTTGTCCAAAAGGTCAGAAAGTATGACGACTTTTTTGGTTACTAAGTTTTTCCCTTTTGATGTGTCTCTCAAAAACTGTGTGGAGCTACATCTGGCTATCCTTGACACACTAGGTAGGATTGCTTCAGTTGAGCTACTGAATAAGTGTTCAATGCAATTTCACAAGAGAGATTCTATGGGAAATAATATGATAGCTATTGACATGAATGAGAAGCAAGTCATTTTAAGGTGTTCTGGAATCATTATCGAGCATTTAAACAGATACAGCAACATCCTTGTGAATGCTCTTGACACTTCATCTCCTCTTTCTCTTAAATTAAAAGCCCTTGATTGGATTTCTAAATCCTGCGAGCATATAACCAGCTTATATGAACGCTTTAGCTCAAGTGTATATCCTTATGATGACCTTGGAAACAGTCCTGCTGTCTGGACCTTGGTTTCCTCTGTATTGGGTGCTGCACTGGACAGGGAACCACGAGTGAGGCTGCAAGTAGCTATAGTTTTTGATCTGCTTATACGAGCAAAGCTTGTTGATCCCAAACACTTCTACCAGGTCGGGGAACTGGTGCTTGAAAAGCTCGGTGATCCAGACACCGCTATAAGAAGTGCATTTCTGAAGCGTCTTTCCTATTTCCTGCCTGTTACATTCTATCTATGCGGCTCATCAAATAGTGGAACAGTTCCAGCAGGTAAGGCCACTTTCTGCAAGATAGGAAATAGACAGAGCTTACATTGGAGGCATGTATTTGCCCTGAAGCAGCTGCCGCAACGTTTGCAACCACAGCAACTTGTTTCTATTTTGAGTTACATGTCACAAAGATGGAAGGCGCCTCTTTCTTCTTGGATTCAACGGATTGTCCAACTCTGCAATAATGCAAAGAACTTGACTCAAAGTCAATCGGAGGAAGCAGCAAGTTCTGATGGAAATAGTCTGTGGATGGACATAAAATTTGAGAGTGATGCTCTTGAAAGAATTGGTTTAGTAAATAACTTAGCTGGTGTATGGTGGGCTATCCATGAAGCAGCTAGATATTGCACAGCTACTCGTCTTCGTACCAACCTTGGTGGACCGACCCAAACTTTTGCAGCGTTGGAAAGGATGCTACTGGACGTAGCACATATGCTGCAACTGGATTCTGACCGCAATGATGGAAGCCTAAGTGTAATGGGTTCTTCTGGTGCTCATTTATTGCCGATGAGGTTACTATTGGATTTTGTTGAGGCTTTGAAGAAAAATGTTTACAATGCTTATGAGGGTTCTTTTGTGCTTCCTTCTGCATCTCGTCAGAGTTCCTTGTTCTTTCGGGCCAACAAAAAGGTCTGTGAGGAGTGGTTCTCGCGCATTTGTGAACCAATGATGAACGCTGGATTGGCATTACAGTGTCATGATGCCACTATCCAGTATTGTTCTCTGCGTCTGCAGGAGCTCAGGAATTCCGCACTTTCTTCCTTGAGGGAGAAGTCTCGAGTACAGATGGCTGAGAATTGGCATAATGTGCAGGGTAGATTAGCCGGTGATGTTATGAGACTTGTACGTCACATGGCTTTGGCTTTGTCCAAGAAACGTGATCCCACAGCTTTGATAGGCTTGCAAAAATGGATGCATCTGACCTTTGCTTCTTTGTTTGAGGAAGAAGCACAGGTTACTCATGGCTATCAGATGTCTGGACCATTCTCATGGATCACAGGTCTTGTACATCAAGCAGAAGGACAATATGAAAAAGCTGCTGCTTTTTTTACTCACTTGTTGCAGACAGAGGAGTCCCTTAGTTCTATGGGAGCTGATGGCATACAGTATACAATTGGACGTGTGATTGACAGCTATGCTGCAATTACTGACTGGGAGTCTCTTGAGTCTTGGTTATTGGAGCTGCCAGCTCTACGGGCGACGCATGCTGGTAAAAGTTACTCTGGTGCTCTAACTACAGCTGGAAATGAAATAAATGCAATACATGCACTGGCACACTTTGATGAGGGTGACACACGAGCAGCATGGGCATCCCTGGACCTGACGCCCAAAAGTAGCTCTGAATTGACTCTGGATCCCAAACTGGCACTACAAAGGAGCGAGCAAATGCTTTTGCAGGCCTTGCTTCATAAAACTGATGGCAATATGGATATAGTTCCAGATGAATTGCAGAAGGCAATGTCCATGCTGGATGAAAGTTTAACTGTTCTCCCACTAGATGGCTTAGCAGAAGCAGCACCATATGCCATCCATTTGCACTGCATATATGCACTGCAGGAGGACTGCAGGCTTATCCAATTTCAGGAGAAGCCTAAGGAATCTGAACCTGTGACGGCGTCCCTGTTGCAGGCTGTGCATCTCCCAATGAATGTTGTCTACCAAGATTGTAATTTATGGCTAAAGCTTTTCAGGGTCTACAAAACCATCCAACCTACTTCCTCTGTTACCTTGCAACTTTGCAAGAATTTAATGGGCTTAGCACGCAAGCAGAGAAATGTAGCATTGGCAAACCGTCTTAAGAACTATCTTAAGGATCAGATTGATAGTTCCCCAGAAGCAGGTGACCAAAAGTTTCTAGTTACAAGTTTACGTTACGAGGAAATCCTATTGATGTATGCTGAAAACAAGTTTGCAGATGCATTTGTGAATATGTGGTCGTATGTGAGCCCATGCTTCCTCTCTCCAGAATGTGCAGATTCTGTTGGCGGTGATAGTCAATTAAAGGCTAAGGCTTGTCTGAAATTATCACATTGGCTGGAGCGGGAGTATCCCGATCTTAGCATGGAAAATATTGCTATGGATATTCTGGCAGATGTTAATAGAGCTGATAATGAGTCCCCTATGGAAAAAAAAACACGTCTAGAATCATTGAGGAAATTGTGGGCACAGCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_66893.p2 GENE.S_Transcript_66893~~S_Transcript_66893.p2 ORF type:5prime_partial len:1483 (+),score=286.97,SMG1|PF15785.1|5.1e-42 S_Transcript_66893:1-4449(+)
LHHQQQQLAALLSVALAKDDSSSSTTTTTTATTSTTTSATSPTQEADESKRLGAINSIHRLIVYPPNSVIVAHSSAFLFQGLSQLLADKSYSVRFSAATAYGALCSVLCSIPLGSNGRQNHVVTLVDNFMNWAMPLLNNVSANNGSTELALESLREFLSVGDVGAIESYAFPILKACQQLLEDERTSLNLLHQLLGVLTMISLKFFRCFQPHFIDLVDLLLGWAMMPDLSESDRRVIMDSFLQFQKYWVSNLQFPLGLLMKFLGDMDMLLQDVNPGTPQQFRRLLALFSCFSTVLRSTASGLLEINLLEQIIEPLSTMIPQLLGCLSLLGKKFGWSKWVEDSWKCLTLLAEILGEKFSIFYPLALDVLFQSLNVDARIKSAGDGKITSFQIHGVLKTNLQLLSLQKLGLLPSSVSKILKWDAPIAQLRLHPNHLVTASAAATYVFLLQHGNGEVVEHSINFLFEELSLLKNMLEKVLASGERDISLVTHNSYSRLELFALFKFDLKVLLSCIHLGKTDSLTSLPDMASLLSKRSESMTTFLVTKFFPFDVSLKNCVELHLAILDTLGRIASVELLNKCSMQFHKRDSMGNNMIAIDMNEKQVILRCSGIIIEHLNRYSNILVNALDTSSPLSLKLKALDWISKSCEHITSLYERFSSSVYPYDDLGNSPAVWTLVSSVLGAALDREPRVRLQVAIVFDLLIRAKLVDPKHFYQVGELVLEKLGDPDTAIRSAFLKRLSYFLPVTFYLCGSSNSGTVPAGKATFCKIGNRQSLHWRHVFALKQLPQRLQPQQLVSILSYMSQRWKAPLSSWIQRIVQLCNNAKNLTQSQSEEAASSDGNSLWMDIKFESDALERIGLVNNLAGVWWAIHEAARYCTATRLRTNLGGPTQTFAALERMLLDVAHMLQLDSDRNDGSLSVMGSSGAHLLPMRLLLDFVEALKKNVYNAYEGSFVLPSASRQSSLFFRANKKVCEEWFSRICEPMMNAGLALQCHDATIQYCSLRLQELRNSALSSLREKSRVQMAENWHNVQGRLAGDVMRLVRHMALALSKKRDPTALIGLQKWMHLTFASLFEEEAQVTHGYQMSGPFSWITGLVHQAEGQYEKAAAFFTHLLQTEESLSSMGADGIQYTIGRVIDSYAAITDWESLESWLLELPALRATHAGKSYSGALTTAGNEINAIHALAHFDEGDTRAAWASLDLTPKSSSELTLDPKLALQRSEQMLLQALLHKTDGNMDIVPDELQKAMSMLDESLTVLPLDGLAEAAPYAIHLHCIYALQEDCRLIQFQEKPKESEPVTASLLQAVHLPMNVVYQDCNLWLKLFRVYKTIQPTSSVTLQLCKNLMGLARKQRNVALANRLKNYLKDQIDSSPEAGDQKFLVTSLRYEEILLMYAENKFADAFVNMWSYVSPCFLSPECADSVGGDSQLKAKACLKLSHWLEREYPDLSMENIAMDILADVNRADNESPMEKKTRLESLRKLWAQQ*

Click here to download the sequence:
Link to NCBI Protein BLAST