Transcript Information: S_Transcript_67035.p1


Annotated TAIR IDAT5G09880.1
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3081646-3085179 | Reverse length=527
E-Value4E-26
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.119085115934
Replicate 213.56913348373
Replicate 314.37321215905
Condition 2: 8 Hour
Replicate 115.718714928591
Replicate 215.649790832485
Replicate 312.709449041468
Condition 3: 24 Hour
Replicate 115.588837044931
Replicate 212.981150292556
Replicate 311.604508693434


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_67035.p1 GENE.S_Transcript_67035~~S_Transcript_67035.p1 ORF type:5prime_partial len:213 (+),score=80.26,RRM_1|PF00076.18|5.6e-06 S_Transcript_67035:3-641(+)
GAAGAAGAGAATGGGGGAGGAGAGAGAAAGAGAGAGGAGAGAGAGAGGGCTGAGAGGAGGAGAGAGAAAGAGGATAGACACAGAAGTGGTGATAGGGATGGAGAGAGGAGAGACAGGGATAGGGATAGGGATAGGGAGAGAGAGAAGGAGAGAGAGAGGAGGGAGAGGAGGGAAAGAGAGAAGGAGAAGGAGAGAGAAAGAGAGCGGTCGAGGCGGAGCAGCAGTCGGTCCAGGCGTCATGATAGCCGGGAGAGAGAGAGGGAGAGGGAGAGAGAGAGGGAGAGAGAGTTGAGAGAGCTTGAGAGTAGGGATAGCAGGAGATTCAAGGAAAAGAAAGAAGCAGTGGAACCTGAAGCTGATCCAGAGAGGGACCAGAGAACTGTTTTTGCCTACCAGATGCCTCTGAAGGCGACTGAGCGAGATGTTTATGAATTCTTCTCAAAAGCTGGAAAGGTGAGGGATGTCAGATTGATCATGGACCGGAATTCACGACGGTCAAAAGGGGTTGGCAATGCGATAAAGATTTCCATGATGAGGGATGATGGGAATACCTTGCTCTCATGTTTAATCAATTCATGCAGCATTGTGAAGGTAGATGACATGAACCTGAGTCTATCTTTTTATTTTCCTTATCTTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_67035.p1 GENE.S_Transcript_67035~~S_Transcript_67035.p1 ORF type:5prime_partial len:213 (+),score=80.26,RRM_1|PF00076.18|5.6e-06 S_Transcript_67035:3-641(+)
EEENGGGERKREERERAERRREKEDRHRSGDRDGERRDRDRDRDREREKERERRERREREKEKERERERSRRSSSRSRRHDSRERERERERERERELRELESRDSRRFKEKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGNAIKISMMRDDGNTLLSCLINSCSIVKVDDMNLSLSFYFPYL*

Click here to download the sequence:
Link to NCBI Protein BLAST