Transcript Information: S_Transcript_67036.p1


Annotated TAIR IDAT5G09880.1
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3081646-3085179 | Reverse length=527
E-Value2E-83
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.554970682377
Replicate 212.387413406046
Replicate 311.212693366441
Condition 2: 8 Hour
Replicate 113.036118997849
Replicate 215.310966178683
Replicate 315.22560543213
Condition 3: 24 Hour
Replicate 111.974770019761
Replicate 211.294258260638
Replicate 311.479800941864


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_67036.p1 GENE.S_Transcript_67036~~S_Transcript_67036.p1 ORF type:5prime_partial len:301 (+),score=104.81,RRM_1|PF00076.18|4.3e-11,RRM_1|PF00076.18|3.4e-21,RRM_6|PF14259.2|2.8e-05,RRM_6|PF14259.2|5.3e-11,RRM_5|PF13893.2|0.16,RRM_5|PF13893.2|0.055 S_Transcript_67036:3-905(+)
GAAGAAGAGAATGGGGGAGGAGAGAGAAAGAGAGAGGAGAGAGAGAGGGCTGAGAGGAGGAGAGAGAAAGAGGATAGACACAGAAGTGGTGATAGGGATGGAGAGAGGAGAGACAGGGATAGGGATAGGGATAGGGAGAGAGAGAAGGAGAGAGAGAGGAGGGAGAGGAGGGAAAGAGAGAAGGAGAAGGAGAGAGAAAGAGAGCGGTCGAGGCGGAGCAGCAGTCGGTCCAGGCGTCATGATAGCCGGGAGAGAGAGAGGGAGAGGGAGAGAGAGAGGGAGAGAGAGTTGAGAGAGCTTGAGAGTAGGGATAGCAGGAGATTCAAGGAAAAGAAAGAAGCAGTGGAACCTGAAGCTGATCCAGAGAGGGACCAGAGAACTGTTTTTGCCTACCAGATGCCTCTGAAGGCGACTGAGCGAGATGTTTATGAATTCTTCTCAAAAGCTGGAAAGGTGAGGGATGTCAGATTGATCATGGACCGGAATTCACGACGGTCAAAAGGGGTTGGGTATATTGAATTTTATGATGCGATGTCTGTGCCAATGGCGATTGCTCTCTCTGGTCAACTACTTCTAGGGCAGCCAGTCATGGTTAAACCATCCGAAGCTGAAAAGAACCTTGTCCAGTCAACAGCTTCCACTGGCTCAAGTGTGACAGGCCCATATGGACCAACTGATAGGAAGTTGTATGTTGGTAATTTGCATTTCAACATGACAGAGCAACAGCTACGTCAGATCTTTGAGCCTTTTGGTCCCGTGGAGCTGGTGCAGCTACCCCTTGACCTGGAGACAGGACACTGCAAAGGTTTTGGGTTTGTTCAATTCGCTCAAGTTGAACATGCAAAGGCAGCTCAGAGTTTGAATGGTAAATTGGAAATTGCTAGTAGATTAAGGTTATGTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_67036.p1 GENE.S_Transcript_67036~~S_Transcript_67036.p1 ORF type:5prime_partial len:301 (+),score=104.81,RRM_1|PF00076.18|4.3e-11,RRM_1|PF00076.18|3.4e-21,RRM_6|PF14259.2|2.8e-05,RRM_6|PF14259.2|5.3e-11,RRM_5|PF13893.2|0.16,RRM_5|PF13893.2|0.055 S_Transcript_67036:3-905(+)
EEENGGGERKREERERAERRREKEDRHRSGDRDGERRDRDRDRDREREKERERRERREREKEKERERERSRRSSSRSRRHDSRERERERERERERELRELESRDSRRFKEKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSTASTGSSVTGPYGPTDRKLYVGNLHFNMTEQQLRQIFEPFGPVELVQLPLDLETGHCKGFGFVQFAQVEHAKAAQSLNGKLEIASRLRLC*

Click here to download the sequence:
Link to NCBI Protein BLAST