Transcript Information: S_Transcript_67039.p1


Annotated TAIR IDAT5G09880.1
Annotated Gene NameSplicing factor, CC1-like
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:3081646-3085179 | Reverse length=527
E-Value1E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.342121254161
Replicate 23.2513584611075
Replicate 33.3002790886443
Condition 2: 8 Hour
Replicate 13.9283613742087
Replicate 21.6484520050325
Replicate 33.4778488197601
Condition 3: 24 Hour
Replicate 16.6684381181814
Replicate 23.8170630023322
Replicate 33.0531948490404


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_67039.p1 GENE.S_Transcript_67039~~S_Transcript_67039.p1 ORF type:5prime_partial len:190 (+),score=78.43,RRM_1|PF00076.18|4.2e-08 S_Transcript_67039:3-572(+)
GAAGAAGAGAATGGGGGAGGAGAGAGAAAGAGAGAGGAGAGAGAGAGGGCTGAGAGGAGGAGAGAGAAAGAGGATAGACACAGAAGTGGTGATAGGGATGGAGAGAGGAGAGACAGGGATAGGGATAGGGATAGGGAGAGAGAGAAGGAGAGAGAGAGGAGGGAGAGGAGGGAAAGAGAGAAGGAGAAGGAGAGAGAAAGAGAGCGGTCGAGGCGGAGCAGCAGTCGGTCCAGGCGTCATGATAGCCGGGAGAGAGAGAGGGAGAGGGAGAGAGAGAGGGAGAGAGAGTTGAGAGAGCTTGAGAGTAGGGATAGCAGGAGATTCAAGGAAAAGAAAGAAGCAGTGGAACCTGAAGCTGATCCAGAGAGGGACCAGAGAACTGTTTTTGCCTACCAGATGCCTCTGAAGGCGACTGAGCGAGATGTTTATGAATTCTTCTCAAAAGCTGGAAAGGTGAGGGATGTCAGATTGATCATGGACCGGAATTCACGACGGTCAAAAGGGGTTGGGTATGTTTCACTGCACTTCTTAGTATACACAGCTGCATGCATTGTTGGAAATAACTCTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_67039.p1 GENE.S_Transcript_67039~~S_Transcript_67039.p1 ORF type:5prime_partial len:190 (+),score=78.43,RRM_1|PF00076.18|4.2e-08 S_Transcript_67039:3-572(+)
EEENGGGERKREERERAERRREKEDRHRSGDRDGERRDRDRDRDREREKERERRERREREKEKERERERSRRSSSRSRRHDSRERERERERERERELRELESRDSRRFKEKKEAVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVSLHFLVYTAACIVGNNS*

Click here to download the sequence:
Link to NCBI Protein BLAST