Transcript Information: S_Transcript_67085.p1


Annotated TAIR IDAT3G25690.1
Annotated Gene NameHydroxyproline-rich glycoprotein family protein
Annotated Gene Symbol(s)CHUP1
Annotation TypeOrtholog
Chromosome Positionchr3:9354061-9357757 | Forward length=1004
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1362.86012500457
Replicate 2484.12063943347
Replicate 3524.22536361712
Condition 2: 8 Hour
Replicate 1312.46048935073
Replicate 2316.35620249932
Replicate 3322.08680748425
Condition 3: 24 Hour
Replicate 1498.30854125738
Replicate 2425.13147776326
Replicate 3467.74023981488


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_67085.p1 GENE.S_Transcript_67085~~S_Transcript_67085.p1 ORF type:complete len:980 (+),score=274.84 S_Transcript_67085:938-3877(+)
ATGATAGTCAGGTTAGGCTTGGTGGTTGCCGCTTCTCTTGCAGCCTATACTGTTAGGCAGGTTAGCGTTAAAGCTCCGAAGGCTCGACGAAACTCTGCAGAAAATGGTGCCGGTGAGAATGAGGAGCAGGAGAAGGAAAAGCTTGAATACGCTAATGATGGCAACAAAGCGGAGGAAGAGGAAGAGGAAGTCAAATTGATAAGTGGAGAAATAAATCCTCGGATCAGTAGTACATTTGCAATAGGGGAGGATGAATTTGCGGAACTTTTTTCGGGGCAGATTGAATTTCCATTACCAGATGACACATTCGATGCAGAGAGAAGTTCAAAGGTGGACCGTCAGAGAGTATATGACGAGGAGATGGCAAATAACGCTAGTGAATTGGAAAGGTTGCGAAGCCTAGTGAAGGAATTGGAGGAAAGAGAAGTGAGACTAGAAGGAGAATTGCTGGAATATTATGGCATGAAAGAGCAGGAATCCGACATCATGGAGCTTCAAAGGCAGCTCAAGATCAAGACCGTTGAGATTGACATGCTTAAGGTTACGATTAACTCACTGCAGGCAGAAAGGAAGAAGCTTCAAGAAGAGCTCGAGGTGGGAGCTTCTGCTAGGAAGGAGCTTGATGTAGCGAGGAACAAGATTAAGGAGCTTCAGAGACAGATTCAGCTTCAAGCAAATCAGACTAAGGGCCAACTTTTGCTGCTTAAACAGCAAGTCAGTGGTTTGCAGGCTAAAGAGGAAGAAGCCTACAAGAGAGACTCTGACGTTGATAAGAAACTTAAAGCTGTGAAGCAATTGGAGATGGACGTAGCTGAGCTCAAGAGAAAAAACATCGAACTTCAGCATGAAAAGCGGGACTTGTTGGTCAAACTCGATGCTGCTCAAGCTAAAGCATCTGCACTGTCCAACATGTCTGAGACTGAGCTAGTTGCAAAGGCTAGGGAGGAGGTGAATGAGTTGAGGCATGCCAATGAGGACTTGCTAAAACAGGTTGAAGGACTTCAGATGAACAGATTCAGTGAAGTTGAAGAGTTGGTTTACTTAAGGTGGGTCAATGCATGCCTGAGATATGAGCTCCGGAACTACCAAACACCTGCTGGCAAGATGTCAGCTCGTGAGCTCAACAAGAATTTAAGCCCCAAGTCTCAAGAGAGGGCAAAGCAGCTGTTGTTGGAATATGCAGGGTCAGAACGTGGACAAGGGGACACAGATCTCGAAAGCAATTTCTCTCAACCATCCTCTCCAGGAAGTGAGGATTTCGACAATGTCTCAATAGACAGCTCCACAAGTAAATATAGCAGTCTCAGTCGGAGGCCAAGCTTGATTCAAAAGCTAAAGAAATGGGGCAAAAGCAAGGATGATTCAAGCGCTCTTTCGTCACCAGCTAGATCTCTAGCAGGAGGCTCACCAAGGAGCAGCAGGGCAAGCATGAGTCAGAGACAAAGGGGGCCACTTGAATCCTTGATGTTAAGGAATGCAAGTGACACTGTTGCAATAACCTCATTTGGGAAGGCAGAAGATGGATCAACTGACATCCCAGACCTCCCACAGATCAAAACAGGAGTTCCTTCTAGCGATGCACTGAATTCTGTGGCAGCATCATTCCAGGTAATGTCGAGATCTGTCGAAGGAGTCATAGATGAGAAATATCCTGCATACAAAGACAGACATAACTTAGCATTAGAGAGGGAAAAGCAGATTAAGGAAAAAGCAGAAAAGGCACGAGCTGAGAAGTTTGGTGACAAGTCAGGATTGAACCCAGATATTAAGATAAGAGATAAAGCTGCCTTGCCACCAAAACTTGCTAAGATAAAGGAGAAGGTTAACATTGCCAGCGAGTCTGGTCTCCAATCTGCTGCTGATAAGGAAGCTGAATCTCCTATGGTGAGCAAAATGAAACTTGAACAGATTGAGAAAAGGCCTCCTAGGGTTCCAAGGCCGCCACCCAAAGGATCGCGTGGGAATGCTGCTGATGGAAATGTGAATGTGTCGGGTGGAGTATCATCAGGGGGCCCACCCCCGCCACCACCACCTCCTCGTGCTCCTGGTGCACCACCTCCTCCACCTCCACTACCAGGTGGCCTGCCAAGGGGGGCAGGAGGCAGTGACAAAGTTCATCGAGCTCCAGAAGTTGTTGAATTTTATCAGAGCCTAATGAAACGCGAGGCAAAGAAAGAGACGCCAGCTTTGATGTCATCAACTTCTAGTACAGCTGATGCTAGGAGCAACATGATTGGCGAGATTGAGAATAGATCCTCCTTCCTCTTAGCAGTGAAAGCTGACGTGGAAACTCAAGGTGATTTTGTTCAGTCATTAGCAACTGAAGTCCGAACAGCTACTTTTGCCGACATAGAAGATCTGGTTGCTTTTGTGAACTGGCTAGACGAAGAACTTTCCTTCTTGGTTGATGAGAGGGCAGTTCTCAAGCACTTTGACTGGCCGGAGGGGAAAGCAGATGCTTTAAGAGAGGCTGCATTTGAATATCAAGATTTGATGAAGTTGGAAAAGCAGGTCACATCTTACGAAGATGATCCCAACATTCCCTGTGAAAAGGCTCTGAAAAAGATGTACTCATTACTCGAAAAGGTCGAGCAAAGTGTGTATGCATTACTACGTACACGAGATATGGCTATTTCACGATATAGGGAGTTCGGCATTCCTGTCAATTGGTTGATGGACACAGGTGTTGTTGGCAAGATCAAGCTGTCATCAGTTCAGCTAGCAAAGAAGTACATGAAACGCGTAGCAACAGAGCTTGATGTGCTAAGTGGACCTGAAAAGGAGCCTAATAGAGAATTCCTACTCCTTCAAGGCATCCGATTTGCTTTTCGTGTACATCAGTTTGCGGGTGGTTTTGATGCTGAAAGCATGAAGGCATTTGAGGACCTGAGAAACCGCGTGCACAATCAATCGAGTGAAGATAATAAGATGCAGTTGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_67085.p1 GENE.S_Transcript_67085~~S_Transcript_67085.p1 ORF type:complete len:980 (+),score=274.84 S_Transcript_67085:938-3877(+)
MIVRLGLVVAASLAAYTVRQVSVKAPKARRNSAENGAGENEEQEKEKLEYANDGNKAEEEEEEVKLISGEINPRISSTFAIGEDEFAELFSGQIEFPLPDDTFDAERSSKVDRQRVYDEEMANNASELERLRSLVKELEEREVRLEGELLEYYGMKEQESDIMELQRQLKIKTVEIDMLKVTINSLQAERKKLQEELEVGASARKELDVARNKIKELQRQIQLQANQTKGQLLLLKQQVSGLQAKEEEAYKRDSDVDKKLKAVKQLEMDVAELKRKNIELQHEKRDLLVKLDAAQAKASALSNMSETELVAKAREEVNELRHANEDLLKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYQTPAGKMSARELNKNLSPKSQERAKQLLLEYAGSERGQGDTDLESNFSQPSSPGSEDFDNVSIDSSTSKYSSLSRRPSLIQKLKKWGKSKDDSSALSSPARSLAGGSPRSSRASMSQRQRGPLESLMLRNASDTVAITSFGKAEDGSTDIPDLPQIKTGVPSSDALNSVAASFQVMSRSVEGVIDEKYPAYKDRHNLALEREKQIKEKAEKARAEKFGDKSGLNPDIKIRDKAALPPKLAKIKEKVNIASESGLQSAADKEAESPMVSKMKLEQIEKRPPRVPRPPPKGSRGNAADGNVNVSGGVSSGGPPPPPPPPRAPGAPPPPPPLPGGLPRGAGGSDKVHRAPEVVEFYQSLMKREAKKETPALMSSTSSTADARSNMIGEIENRSSFLLAVKADVETQGDFVQSLATEVRTATFADIEDLVAFVNWLDEELSFLVDERAVLKHFDWPEGKADALREAAFEYQDLMKLEKQVTSYEDDPNIPCEKALKKMYSLLEKVEQSVYALLRTRDMAISRYREFGIPVNWLMDTGVVGKIKLSSVQLAKKYMKRVATELDVLSGPEKEPNREFLLLQGIRFAFRVHQFAGGFDAESMKAFEDLRNRVHNQSSEDNKMQL*

Click here to download the sequence:
Link to NCBI Protein BLAST