Transcript Information: S_Transcript_67090.p1


Annotated TAIR IDAT3G09180.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Mediator complex subunit Med27 (InterPro:IPR021627); Has 112 Blast hits to 112 proteins in 38 species: Archae - 0; Bacteria - 0; Metazoa - 79; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:2819278-2821096 | Forward length=402
E-Value1.6E-154
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.3392766987171
Replicate 26.4948886113133
Replicate 36.5067630676973
Condition 2: 8 Hour
Replicate 16.7091115604463
Replicate 28.0940845640359
Replicate 38.3826366985882
Condition 3: 24 Hour
Replicate 14.908962582156
Replicate 25.7550802429826
Replicate 37.3115589399101


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_67090.p1 GENE.S_Transcript_67090~~S_Transcript_67090.p1 ORF type:5prime_partial len:445 (+),score=71.61,Med27|PF11571.4|2.7e+03,Med27|PF11571.4|5.4e-26 S_Transcript_67090:2-1336(+)
AGTAACCTCGGAATTAAACAAGAGCGGGACCGATCATCGGAAAGAGACTCCTCATATCAGCACACCTTTACTAAAATGCTGCAACACTCTCAAAACCACCACCATCTTCATCAACAACAACAACCACAAACTCTACAAACACCGCCGCAAACGACGTCGTCGACACCGTCTCCGCCAGAAACAACCGGAGAAGCGCCGCTGAAACAGGTCGCTATGGCGATGGATCGCCTCGGCGAAGCCGCTCGTCTTATCGCCGACATTCGGCTCGGCGCTGATCGCCTTCTTGAAGCCTTGTTTATTTCCTCCGAAACTCATCAGTCTTCCAAAACTCTCAATTTGATTCTTAAAGAAGAGTCTTCTATGCGACAATACCTCCAGGATCTTCGTGATATCGGAAGGCAACTTGAGAATTCTGGGGTTCTCAGTGAAGCGCTACGATCTCGAAGCAATTCTTGGGGATTGCACATGCCTTTGGTTTGTCCAGATGGTGCAGTTGTTGCATATGCATGGAAGAGGCAACTTGCTGGCCAGGCTGGTGCTTCTGCTGTTGACAGGACTAGACTAGCTCTGAAGTCCTTCATGGATCAAAGACGTAGATTTTTTCCTCACCTTGACTCTGAATCAGCCTCAAAGAAACAACGCGTTTCTGAAGAAGCTTTGGAGAACCTAGAAGAACTTAGCGAGTACAAAACACTGGCAGATATCATAAAATGTCTTGAGAAAGAAGTGCCCAGCTTGAAGATTTGCACTTATGAAAGGTTGGAGTGGTTGGATAAAGCTGCTTCACTTCCTGCTTCAGAAAGTGACAGTTCTTTTGATACACCAATGGAGCATGATCATGATGCAAGAACTGGATCCTTTGGTGGTGTTCCTTCAGATAAAGTTGCTGTGATTGAGTTGTTGATACCTTCTGTCTTTAGAGCTATTGTATCAGTACACCCTGTTGGTTCCGCAGATCCTGATGCAGTAGCCTTCTTTTCACCTGATGAGGGAGGAAGTTATGTTCATGCTAGAGGTTTATCAGTTTATCATGTATTTAGGCATATTACGGAACTATCGAATATAGCTTTGCAACATTTTCTTGGAAATAAATCAGAGGTGGCCCTGTACTTTCTTCTGCAATGGATCAGCAGCTACCAAAGTCTATTTACCCAAGTGTGCAGCAAATGCGGACGGCTATTATCATTGGATAAACAATCAGCACTTTTATTGCCTCCAGTGCATCGTCCCTATCGGGAGCTCTCTGCGGATAACACTGCATCAACCTCACCAAAGGATCAGAGTTCAAACACATTGCTAGCGTATCATGTCAGCTGCTCTCCACCAGATATATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_67090.p1 GENE.S_Transcript_67090~~S_Transcript_67090.p1 ORF type:5prime_partial len:445 (+),score=71.61,Med27|PF11571.4|2.7e+03,Med27|PF11571.4|5.4e-26 S_Transcript_67090:2-1336(+)
SNLGIKQERDRSSERDSSYQHTFTKMLQHSQNHHHLHQQQQPQTLQTPPQTTSSTPSPPETTGEAPLKQVAMAMDRLGEAARLIADIRLGADRLLEALFISSETHQSSKTLNLILKEESSMRQYLQDLRDIGRQLENSGVLSEALRSRSNSWGLHMPLVCPDGAVVAYAWKRQLAGQAGASAVDRTRLALKSFMDQRRRFFPHLDSESASKKQRVSEEALENLEELSEYKTLADIIKCLEKEVPSLKICTYERLEWLDKAASLPASESDSSFDTPMEHDHDARTGSFGGVPSDKVAVIELLIPSVFRAIVSVHPVGSADPDAVAFFSPDEGGSYVHARGLSVYHVFRHITELSNIALQHFLGNKSEVALYFLLQWISSYQSLFTQVCSKCGRLLSLDKQSALLLPPVHRPYRELSADNTASTSPKDQSSNTLLAYHVSCSPPDI*

Click here to download the sequence:
Link to NCBI Protein BLAST