Transcript Information: S_Transcript_67116.p1


Annotated TAIR IDAT5G19080.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6378400-6380287 | Forward length=378
E-Value3.4E-120
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 113.133688921258
Replicate 211.805025061943
Replicate 311.400964124408
Condition 2: 8 Hour
Replicate 115.121640406694
Replicate 214.062304859257
Replicate 315.280971270065
Condition 3: 24 Hour
Replicate 110.950811723856
Replicate 211.24360522359
Replicate 310.612912191244


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_67116.p1 GENE.S_Transcript_67116~~S_Transcript_67116.p1 ORF type:5prime_partial len:385 (+),score=86.09,zf-C3HC4_3|PF13920.2|6.5e-17,zf-C3HC4_2|PF13923.2|1.3e-08,zf-RING_2|PF13639.2|2.7e-06 S_Transcript_67116:3-1157(+)
CAAAACCACCGCTTTCACCACCACCACCACCACCCACCACTACCACCACCACCACTACCACCACCAACTCCTCCACCACCACCACCACCACCACATAATTACTTCTACACTTCTTCTGATCCAACACCACCCCCATCAGCACCACCACCAAACAACTATGTGTATATGTCTACAGGTACAAGCCCTTACCCCACCAACACTACAAGTAGTAGTAATCAGTATAATTACCAATACCCACCTCCCCAACAGTCAAATTATTACTACCCAGGTTACCAAAATGCCTTCAATTATGCGAATCCTTTGATGGCTCGTCCCAATTTCCCATCTTATTATGGTGGAAATGTTGGGTGGGGTCAAACTCCAACTGGCCCACCACCTTTGGCTACCCCACCTCCTCCTTATGTAGAGCATCAGAATGCTAGAGTTGTTAAAAATGATGTTAATGTTCATAAAGATACTATCAAGTTTGTTGTTGATGAGAATTACCCTGATCATCACTTGCTTTCCTTTGTCTTTGATGCCCGTTTTGATGGCAGCATAACGATATATTACTTTGTGAAGGAGGAAGGAGAGAGCTGCAAGTTCACCCCTCTATATCCTGAAGCACCTAGGCCGGTAAAAGTTCCTTTCCAAAATGGATTAGGGCAGCGATTTTGTCAGCCTTCAGGCACTGGTGTGGACTTGGGCTTTTATGATCTAGAAGATCTTGAAAAACCTTCTGCAGATGATGTCTTTCCACTTGTTATATTTGCCGAAGTATCATCACCTGTAGCAGATGATGAGGAAGGAGCAACTTCATCAGAAGTCTCTCCAAGGCTACAGGTTACACAAGCTGTAATAGAGAGAAAGAATGATGGTTCCTTCCAAGTGAAAGTGATCAGGCAGATACTGTGGATTGATGGTGTTCGTTATGAAGTACGTGAACTTTATGGAATTAGAAATTCGTCTGCAGAAGGCTTTAATGATGATGATCCAGGAAAGGAGTGTGTAATTTGCATGACTGAACCCAAGGATACGGCTGTGATGCCTTGCCGGCATCTGTGCATGTGTAGTGATTGTGCCAAAGAGCTGAGACTTCAATCCAATAAGTGTCCAATTTGCCGCCAACCAATTACCGAGCTTATTGAGATCAGGATAAATGAAGATGGTCAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_67116.p1 GENE.S_Transcript_67116~~S_Transcript_67116.p1 ORF type:5prime_partial len:385 (+),score=86.09,zf-C3HC4_3|PF13920.2|6.5e-17,zf-C3HC4_2|PF13923.2|1.3e-08,zf-RING_2|PF13639.2|2.7e-06 S_Transcript_67116:3-1157(+)
QNHRFHHHHHHPPLPPPPLPPPTPPPPPPPPHNYFYTSSDPTPPPSAPPPNNYVYMSTGTSPYPTNTTSSSNQYNYQYPPPQQSNYYYPGYQNAFNYANPLMARPNFPSYYGGNVGWGQTPTGPPPLATPPPPYVEHQNARVVKNDVNVHKDTIKFVVDENYPDHHLLSFVFDARFDGSITIYYFVKEEGESCKFTPLYPEAPRPVKVPFQNGLGQRFCQPSGTGVDLGFYDLEDLEKPSADDVFPLVIFAEVSSPVADDEEGATSSEVSPRLQVTQAVIERKNDGSFQVKVIRQILWIDGVRYEVRELYGIRNSSAEGFNDDDPGKECVICMTEPKDTAVMPCRHLCMCSDCAKELRLQSNKCPICRQPITELIEIRINEDGQ*

Click here to download the sequence:
Link to NCBI Protein BLAST