Transcript Information: S_Transcript_67222.p1


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeOrtholog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value7.4e-322
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.8879493098616
Replicate 23.2730511980929
Replicate 32.4573425825677
Condition 2: 8 Hour
Replicate 110.018246550082
Replicate 27.6519097682581
Replicate 37.847042799636
Condition 3: 24 Hour
Replicate 13.2707311819708
Replicate 22.2414758701882
Replicate 33.0141728890729


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_67222.p1 GENE.S_Transcript_67222~~S_Transcript_67222.p1 ORF type:complete len:728 (+),score=92.62,Ion_trans|PF00520.27|3.1e-37 S_Transcript_67222:564-2747(+)
ATGTCTGAAGTCAATATACAGCTTACTGAAGCAATGAATTACAGGCCAGCAAGAGTTGCAAGTGTCAGTTTTGAGGACAGGTATTCAGAGGGCTCGATGAGTTCTGAGCACCCACTGTATCCTACAAAGAAGCTGCTTCCTGAGAGAAGAGCGTCATTTGACATGGCCTTGGATGTTATTCGAAGAGGCTTTCAGAGAAGTTCACGAGGGATCAGAAGCTTGAGGGTGTCACTGAGCTTACATTCATTCTATGATCAATCACCGAGCAAGCCAGTTCACCTGAGAAAAATTCTTGATCCCCAGGGACCGCTTCTTCAGAAATGGAACAAGATATTTCTAATCTCATGTGTGTTTGCTCTAGCATGGGATCCGTTGTTCTTCTACATCCCAGTTATAGATGGCAAGAACCAGTGCCTCAAGTTGGATCAGAATTTGGAAATCATAGCTTGTGTTCTACGTACAATCTCAGATTTGTTCTACCTACTTCATATAATTATACAGTTTCGTACAGGCTTTATCTCCCCTTCTTCTCGAGTGCTAGGCCGAGGTGAATTGATCAAGGACCCTGTTGCAATAGCCAAAAAATACGTCTTTCCATACTTCTTCATTGACATTCTAGCTGTGCTCCCCATGCCCCAGCTGGCAGTTTTATGTGTCATTCCAAAGTTGCCAAGTCATTTTACTGCAAAGAGGGTGTTGAAAATTGTGATCTTCACCCAATATGTCCCAAGGATTTTTCGGATTTACCCTTTGTACAAGGAAGTGACACAGACTTCAGGCATAATTACTGAGACACCATGGGCTGGAGCTGCATTTAACCTGTTTCTCTACATGCTAGCGAGCCATGTGGTAGGAGCAGCTTGGTATTTGTTTTCAATTGATCGGCAGAGCAGATGCTGGCGGAAGTCATGCGAGGGACCAGAATGCCATAATATGTCCCTATATTGCAAGTACAAGACCAAGGGAATTAAGTTCAATGAGAGCTACTGCAAACTTATAGACCCTGATGACATAAAAGATTCTACCGTCTTTAACTTTGGCATGTTCTATAATGCTCTTCAATCAGAAGTGGTGCAATCCACTGATGTTTTCAAGAAGCTGTTTTACTGTTTTTGGTGGGGCCTTCAAAATCTCAGCTCTCTTGGTCAAAATCTCAAAACGAGTACTTTTATTGGAGAGAACTTGTTTGCTGCCTTCATCTGTTTGTTTGGACTGGTTCTGTTTTCATTTCTCATCGGGAATATGCAGAAATATCTACAATCTACCACGGTCAGAATAGAGGAGATGAGGGTGAGATGGCGAGACTCAGAGCAGTGGATGTCACATCGTATGCTTCCTGAGGAATTGAGGGAGAGGATTAGGAGGTACGAACAATACAAATGGCAAGAAACAAGAGGTGTTGATGAAGAGTTCGTAATTCGTAACCTTCCTAAGGACCTTAGGAGGGACATTAAACTCCATCTTTGCTTGGATCTCCTTATGAGAGTACCGATGTTTAAGAAAATGGATGAAAAGTTGATAGATGCCATGTGTGATCGCCTGAAACCAGTGCTTTACACTGAGAACAGCTCCATTTTACGAGAAGGGGACCCAGTTAACGAGATGCTGTTTATTATGAGAGGAAACCTATTGACTATGACTATTGGTAGAACTGGCTTCTTTAACTCGGTTTTTCTTGATGCTGGTGATTTCTGTGGGGAAGAGCTACTTACATGGGCTCTAGATCCACACACCTCCGCAAATCTGCCCATCTCAACTAGGACTGTACAGACTAAAAGTGAGGTTGAAGCCTTTGCACTTATGGCAGACGATCTTAAGTTTGTGGCTTCACAGTTTCGTCGACTTCACAGTAAGCAGCTCCGACACACATTCAAGTTCTATTCACAGCAATGGAGGACATGGGCAGCATGTTTTATACAAGTAGCATGGCAAAGGCGCTGTAGGCGGAAGGTTGAGAAATCTCTAAAAGAGGCTGAATATCGGTTAAAGAACGCTCTAGTCAAGGAAGGTGGAGGTTCAGGCTCCCCAAGCTTAGGTGCCACCATTTATGCATCAAGGTTTGCTGCCAATGCATTACGGAACCTACGACGGAATAGTGCCCGAAATCCCAGAATGTCTCAAAGGCTTTCTTCCCTCAACCTGCAAAAGCCTACCGAGCCTGATTTCACTTCTGAAGATGGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_67222.p1 GENE.S_Transcript_67222~~S_Transcript_67222.p1 ORF type:complete len:728 (+),score=92.62,Ion_trans|PF00520.27|3.1e-37 S_Transcript_67222:564-2747(+)
MSEVNIQLTEAMNYRPARVASVSFEDRYSEGSMSSEHPLYPTKKLLPERRASFDMALDVIRRGFQRSSRGIRSLRVSLSLHSFYDQSPSKPVHLRKILDPQGPLLQKWNKIFLISCVFALAWDPLFFYIPVIDGKNQCLKLDQNLEIIACVLRTISDLFYLLHIIIQFRTGFISPSSRVLGRGELIKDPVAIAKKYVFPYFFIDILAVLPMPQLAVLCVIPKLPSHFTAKRVLKIVIFTQYVPRIFRIYPLYKEVTQTSGIITETPWAGAAFNLFLYMLASHVVGAAWYLFSIDRQSRCWRKSCEGPECHNMSLYCKYKTKGIKFNESYCKLIDPDDIKDSTVFNFGMFYNALQSEVVQSTDVFKKLFYCFWWGLQNLSSLGQNLKTSTFIGENLFAAFICLFGLVLFSFLIGNMQKYLQSTTVRIEEMRVRWRDSEQWMSHRMLPEELRERIRRYEQYKWQETRGVDEEFVIRNLPKDLRRDIKLHLCLDLLMRVPMFKKMDEKLIDAMCDRLKPVLYTENSSILREGDPVNEMLFIMRGNLLTMTIGRTGFFNSVFLDAGDFCGEELLTWALDPHTSANLPISTRTVQTKSEVEAFALMADDLKFVASQFRRLHSKQLRHTFKFYSQQWRTWAACFIQVAWQRRCRRKVEKSLKEAEYRLKNALVKEGGGSGSPSLGATIYASRFAANALRNLRRNSARNPRMSQRLSSLNLQKPTEPDFTSEDG*

Click here to download the sequence:
Link to NCBI Protein BLAST