Transcript Information: S_Transcript_67380.p1


Annotated TAIR IDAT5G01520.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:206797-208399 | Forward length=242
E-Value1E-123
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 114.164984528403
Replicate 217.08086933485
Replicate 313.088393349652
Condition 2: 8 Hour
Replicate 138.007348871664
Replicate 237.256344710513
Replicate 339.36555727049
Condition 3: 24 Hour
Replicate 113.036462728258
Replicate 211.880223810182
Replicate 314.64505804168


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_67380.p1 GENE.S_Transcript_67380~~S_Transcript_67380.p1 ORF type:complete len:248 (+),score=40.04,zf-C3HC4_3|PF13920.2|6.2e+03,zf-C3HC4_3|PF13920.2|2.2e-10,zf-RING_2|PF13639.2|8.9e+02,zf-RING_2|PF13639.2|1.5e-08,zf-C3HC4_2|PF13923.2|8.4e+03,zf-C3HC4_2|PF13923.2|5.3e-07,zf-C3HC4|PF00097.21|3.6e+03,zf-C3HC4|PF00097.21|8.9e-07 S_Transcript_67380:26-769(+)
ATGTACGTTGCTTCTATGCGAAAGTCTTTCAAGGATTCTCTCAAAGTCCTGGAAGCAGATATTCAACATGCTAATACTCTAGCCTCTGAATTTCCTAGAGAGTATGATGGGGCCTGCCTTCAAATGAGAATGTCTTATGCTCCTGCTGCCCACTTTCTGCTCTTCTTGGTCCAGTGGACCGACTGTCACTTGGCTGGGGCGTTGGGTCTTTTAAGGATTCTCATCTATAAAGTTTATGTTGATGGCACCACTACCATGTCGACCCATGAAAGGAAAGCAAGTATCAGAGAGTTCTATGCTGTCATATATCCTTCCTTGTTACAACTTCAAAGTGGTGTTACTGACAATGAGGATAAAAAGCAGAAGGCTGTATGCATGGAGAGATACAGGAAGAGAGATGAGGATGAATATAGACACTACTCGGATATGGATTTTGAAAGAGAGGAAGAGTGTGGAATTTGCATGGAGACGAATGGTAAAATTGTGCTCCCTAACTGCAACCATGTGATGTGCTTGAAATGCTACCGTGAATGGCGCTCAAGATCGCAATCATGCCCATTCTGCCGAGACAGCCTCAAGAGGGTGAACTCTGGTGATCTTTGGGTGGTCACTGACAGTAGAGACGTGGTTGATATGGCAACGTTAACGAAGGAAAATTTGAGAAGGCTGTTTATGTACATAGAGAAACTGCCCCTGATTGTTCCAGATTCGTTATTCGACGGCTATGATTCTCACCTGAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_67380.p1 GENE.S_Transcript_67380~~S_Transcript_67380.p1 ORF type:complete len:248 (+),score=40.04,zf-C3HC4_3|PF13920.2|6.2e+03,zf-C3HC4_3|PF13920.2|2.2e-10,zf-RING_2|PF13639.2|8.9e+02,zf-RING_2|PF13639.2|1.5e-08,zf-C3HC4_2|PF13923.2|8.4e+03,zf-C3HC4_2|PF13923.2|5.3e-07,zf-C3HC4|PF00097.21|3.6e+03,zf-C3HC4|PF00097.21|8.9e-07 S_Transcript_67380:26-769(+)
MYVASMRKSFKDSLKVLEADIQHANTLASEFPREYDGACLQMRMSYAPAAHFLLFLVQWTDCHLAGALGLLRILIYKVYVDGTTTMSTHERKASIREFYAVIYPSLLQLQSGVTDNEDKKQKAVCMERYRKRDEDEYRHYSDMDFEREEECGICMETNGKIVLPNCNHVMCLKCYREWRSRSQSCPFCRDSLKRVNSGDLWVVTDSRDVVDMATLTKENLRRLFMYIEKLPLIVPDSLFDGYDSHLK*

Click here to download the sequence:
Link to NCBI Protein BLAST