Transcript Information: S_Transcript_678.p1


Annotated TAIR IDAT5G06770.1
Annotated Gene NameKH domain-containing protein / zinc finger (CCCH type) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:2090937-2092787 | Reverse length=240
E-Value3.9E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 177.532543598492
Replicate 263.982089716793
Replicate 363.074157405914
Condition 2: 8 Hour
Replicate 165.184609736037
Replicate 266.593536117586
Replicate 368.06860668524
Condition 3: 24 Hour
Replicate 166.55407836801
Replicate 263.53421845236
Replicate 362.466596643338


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_678.p1 GENE.S_Transcript_678~~S_Transcript_678.p1 ORF type:complete len:300 (+),score=69.05,zf-CCCH|PF00642.20|0.0013,zf-CCCH|PF00642.20|0.00054,zf-CCCH|PF00642.20|1e-08,KH_1|PF00013.25|6.8e-11,Torus|PF16131.1|0.011,Torus|PF16131.1|1.3e+02,Torus|PF16131.1|0.001,zf-CCCH_2|PF14608.2|1.3,zf-CCCH_2|PF14608.2|0.12,zf-CCCH_2|PF14608.2|0.0041 S_Transcript_678:274-1173(+)
ATGGAGTTCGGTGGACCTCGCAAGAGAGGCAGGCCTGAAGCTGCCCTTAACGGTAATGGTGGCTTCAAGAAATCTCGTCCAGAATCGGAGTCCTTTCCATCTGGTGTAGGAAGCAAATCGAAGCCTTGCACAAAGTTTTTCAGCACATCGGGCTGCCCATTCGGAGAGGGTTGTCACTTCTTGCATCATGTCCCTGGTGGATACAAAGCTGTGGTCCAGATGATGAACCTTGGAGGTGCTCCAGTTCCTCCACCAGCAAGAACTTCTGCAGTCCCCCTGTCTTTCCCCAATGGTTCATCAGCACCATCAGGCAAATCTAGAATGTGCAACAAGTTTAATACCCCTGAGGGCTGCAGGTTTGGAGACAAGTGTCACTTTGCTCACGGTGAATGGGAGCTTGGTAGGCCATCCATTGCATCACATGACGATCCACGTGCCATGCCACCAATGTCAGGCAGGATGCCTGGCAGGATGGACCCTTTACCTCCAAGTCTCGGTGCTGCTGCCAACTTTGGCGCCTCTGCTACAGCCAAGATCAGTATTGACGCTTTGCTCGCAGGAGCAATTATTGGAAAGAGTGGGACGAACTCTAAGCAGATTTGTCGTGTTACTGGTGTGAAACTTGCCATCAGAGATCATGAATCTGATCCCAACTTGAGGAACATTGAACTCGAAGGTACATTTGATCAGATCAAGCAGGCTAGTTCTATGGTTCGGGAGCTGATAGTTAATGTTAAGGCGGCTTCTGGTGCTCCACCTGCCAAGCACGCAACAGGTCCTGGTGCTGCGAACAATTTCAAGACTAAGCTTTGTGAAAACTTCACAAAGGGATCCTGCACATTTGGAGACAGGTGCCACTTCGCTCATGGTGCTGAAGAGCTTCGAAAGACTGCAGTGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_678.p1 GENE.S_Transcript_678~~S_Transcript_678.p1 ORF type:complete len:300 (+),score=69.05,zf-CCCH|PF00642.20|0.0013,zf-CCCH|PF00642.20|0.00054,zf-CCCH|PF00642.20|1e-08,KH_1|PF00013.25|6.8e-11,Torus|PF16131.1|0.011,Torus|PF16131.1|1.3e+02,Torus|PF16131.1|0.001,zf-CCCH_2|PF14608.2|1.3,zf-CCCH_2|PF14608.2|0.12,zf-CCCH_2|PF14608.2|0.0041 S_Transcript_678:274-1173(+)
MEFGGPRKRGRPEAALNGNGGFKKSRPESESFPSGVGSKSKPCTKFFSTSGCPFGEGCHFLHHVPGGYKAVVQMMNLGGAPVPPPARTSAVPLSFPNGSSAPSGKSRMCNKFNTPEGCRFGDKCHFAHGEWELGRPSIASHDDPRAMPPMSGRMPGRMDPLPPSLGAAANFGASATAKISIDALLAGAIIGKSGTNSKQICRVTGVKLAIRDHESDPNLRNIELEGTFDQIKQASSMVRELIVNVKAASGAPPAKHATGPGAANNFKTKLCENFTKGSCTFGDRCHFAHGAEELRKTAV*

Click here to download the sequence:
Link to NCBI Protein BLAST