Transcript Information: S_Transcript_6787.p1


Annotated TAIR IDAT3G26890.1
Annotated Gene Nameunknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G41110.1); Has 393 Blast hits to 383 proteins in 134 species: Archae - 0; Bacteria - 61; Metazoa - 171; Fungi - 74; Plants - 80; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:9907456-9910463 | Reverse length=649
E-Value1E-85
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 148.814806375215
Replicate 262.108263754374
Replicate 361.189461362302
Condition 2: 8 Hour
Replicate 141.131711734963
Replicate 236.990166175548
Replicate 337.229733830618
Condition 3: 24 Hour
Replicate 189.593946809368
Replicate 264.545293516748
Replicate 363.884328911041


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6787.p1 GENE.S_Transcript_6787~~S_Transcript_6787.p1 ORF type:complete len:730 (+),score=150.22,Chromosome_seg|PF13889.2|2.1e-25,DUF4210|PF13915.2|3.2e-05 S_Transcript_6787:4978-7167(+)
ATGGGTTTGCCACAGGTATCCTCTGATGAAAATAGTGAGGAACATCATGGAAGGTTGAGGCAGTGCACTTGTAATCTTCCCCATTGCAGCAATGTAACGACACCTGATTTGGATGGATTGTGTGGTCCACACACAAGTCCACCTGGTAGAAATTCATCATTCTCTTCGACAAGAGAATTCCAAAGTGATACACCGGAGCATGCAGCTACTTCAGATTTCTCTTTTAAGCCTAGAGGGAACAGGGATATCGTGCCTTATGTTCCCAGATTGGAAATTGTGCCCAAAGACATTGGTTTGTGGAGTCGTAGACGTGGAGAAAATGTTCAATCTCCAGTTTCTAGGATAATAGGATTTCAATCAAATGACAATACAAAAGGCTCCAGTGCTGATTCTACTGATGTGGCTGCTTGTGCTGTGAATGATACTGAATCAAGTTGGTTAGCAGTTCAGAAGCGATTGTCATCACCATTAAACCGAATGGAGTTCCCCAACAACTGCAAAGAGGATTCTTTAAACATTTGTAATGGTGTCTTGTCCCCTGTCACAACTGAGAAAACTAATCATCCTGGCGCACATGACCTTAAAAAAGCAGACATTGGACCCAAGGACCGAATAAGTACCCCAGTCTCGTCATTCTCTTTCAGCAGGGAGTGGATGAGTGGGTCTTGTGGAATTGGTAGAAAAGCCTCATATTTTTTTACCGATGGCCCAGTATCAGCAAACCAGGGATCTCTGCAAACATTAGATGTTTATTCATCTTCTCGTGGAATTAGTGACCAGGAAAAATCAAGAAGCCATGTTGGAGGGAACTTTTCATGCTTGGAGAAGGTGGTCACCACTTCTCTTCCGTCATCTCCTCTTGGTCGAAAATCCTGTGAGAGGGTTGAATCTACAAATGGATGTCAGATTCTCACAAGGAAGTTAGAAGCTGACTATAGGGCATTTAGTAGTGTCGGGCTGTCATTTGATGGATCAATTGCTGGGATCTTTCCTGTGGAAGAAGAGGGGTTTAATGCCACAGGAACAACAATGGAAGAATTTTGGCCATCCTTCTTGGATACCGCTACTGGGTTAACTTGGCCTATTTGTCATGATTTGAGCCCCAATCTTCATAGCATGAGATCATTTAGAAGCTTGAGTGGGCTTTCTGTTAGGAGGTCTTTGGTTGGTTCATTTGAGGAGTCTCTATTGTCTGGTAGATTTTCATTTGGTAGTGCTAATCAGGAAATCGATGGATTTCTTGCTGTTCTAAGTATCACTGGGGGTAATTTCTCGCCAAAATCACAGAAACTTCCCTTTTCTGTCACCAGTGTGGATGGAGATAGCTCCTTATTGTACTATGCATCCATAGACCTTGCAGGCAAGTCTGCTTCCAGTGCAAGTGGTGGCCAAAAGTTCAGAAGAAGTCTTAGCAATGGTGATCAACAATCCATCAAGAGTCGATTGCGCATTCCGATGAAAGGACGGATACAGCTGGTACTTAGCAATCCTGAGAAAACACCTGTTCATACCTTCTTTTGCAGCTATGATTTGAGTGACATGCCTGCTGGTACCAAGACATTCATGCGCCAGAGGATCACACTTGCATCTGCTAAAGTCTCCACTGAGCCTGAGCAAGATAACAGTTCTCCTGTAGGACTCGGTACACAATCAAGAAATGCATTTGAAGAAAATATTACAAATGCAAGCAATGGTACTGGACCGAGTATTCAAGTTGAAGTTAATGAAAGCTTAGATGTGGCAGGTTGTGGTAGGGAAGGAGAACCATTCGATTTACACAAAACTCCAGGAAAGATGGGCACAACTGGTCATGATTTCAATGGAAGTGAATGTGAAGGCACCTGTGGTGAAGATTTCTCCCAGGATTTGGGCAATGAGAAGAAAGCTTCAATGGGTTCCTCTAAGGTTAAAGAGAGTCTTAGTAGTTCTGGGGCCTTACGTTATGCTCTTCATCTCCGTTTCTTTTGCCCTGCACCCAAAAAAGTTTTTAAATCAGTCAAAAGGTGCTACTCTGATGCTCGTAGTTTACCTCAGGATAATTGCGCAGAAAATGAACGGGAAAGAAGATTCTACCTGTATAATGACCTGAGGGTTGTGTTTCCCCAAAGGCATACAGATTCCGATGAAGGCAAGTTGAATGTAGAATACCATAGCCCGGGAGATCCAAAGTATTTCGACATTGGTGACTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6787.p1 GENE.S_Transcript_6787~~S_Transcript_6787.p1 ORF type:complete len:730 (+),score=150.22,Chromosome_seg|PF13889.2|2.1e-25,DUF4210|PF13915.2|3.2e-05 S_Transcript_6787:4978-7167(+)
MGLPQVSSDENSEEHHGRLRQCTCNLPHCSNVTTPDLDGLCGPHTSPPGRNSSFSSTREFQSDTPEHAATSDFSFKPRGNRDIVPYVPRLEIVPKDIGLWSRRRGENVQSPVSRIIGFQSNDNTKGSSADSTDVAACAVNDTESSWLAVQKRLSSPLNRMEFPNNCKEDSLNICNGVLSPVTTEKTNHPGAHDLKKADIGPKDRISTPVSSFSFSREWMSGSCGIGRKASYFFTDGPVSANQGSLQTLDVYSSSRGISDQEKSRSHVGGNFSCLEKVVTTSLPSSPLGRKSCERVESTNGCQILTRKLEADYRAFSSVGLSFDGSIAGIFPVEEEGFNATGTTMEEFWPSFLDTATGLTWPICHDLSPNLHSMRSFRSLSGLSVRRSLVGSFEESLLSGRFSFGSANQEIDGFLAVLSITGGNFSPKSQKLPFSVTSVDGDSSLLYYASIDLAGKSASSASGGQKFRRSLSNGDQQSIKSRLRIPMKGRIQLVLSNPEKTPVHTFFCSYDLSDMPAGTKTFMRQRITLASAKVSTEPEQDNSSPVGLGTQSRNAFEENITNASNGTGPSIQVEVNESLDVAGCGREGEPFDLHKTPGKMGTTGHDFNGSECEGTCGEDFSQDLGNEKKASMGSSKVKESLSSSGALRYALHLRFFCPAPKKVFKSVKRCYSDARSLPQDNCAENERERRFYLYNDLRVVFPQRHTDSDEGKLNVEYHSPGDPKYFDIGD*

Click here to download the sequence:
Link to NCBI Protein BLAST