Transcript Information: S_Transcript_68032.p1


Annotated TAIR IDAT3G19950.1
Annotated Gene NameRING/U-box superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:6942853-6943839 | Forward length=328
E-Value1.8E-103
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.081891084992
Replicate 27.601465309732
Replicate 36.4058803203543
Condition 2: 8 Hour
Replicate 14.7190639637353
Replicate 25.0759656577531
Replicate 35.2543265804996
Condition 3: 24 Hour
Replicate 17.0980573806973
Replicate 27.1736994625413
Replicate 37.4182483544459


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68032.p1 GENE.S_Transcript_68032~~S_Transcript_68032.p1 ORF type:complete len:357 (+),score=62.58,zinc_ribbon_9|PF14369.2|4e-15,zinc_ribbon_9|PF14369.2|2.9e+03,zinc_ribbon_9|PF14369.2|4.8e+03,zf-RING_2|PF13639.2|75,zf-RING_2|PF13639.2|2.4e-12,zf-RING_11|PF17123.1|5.3e-08,zf-C3HC4_2|PF13923.2|2.1e+02,zf-C3HC4_2|PF13923.2|6.2e-06,zf-C3HC4|PF00097.21|14,zf-C3HC4|PF00097.21|9.8e-06 S_Transcript_68032:156-1226(+)
ATGTCAAGTGCCGGCGTAACAATCGCAACCCCACAATCCTATTTCTGCTACCAATGTAATCGCACCGTCACTCTCACCCCTTTACCCAATTCCGACCTCTCTTGCCCCGATTGCAATGGCGGTTTCCTTGAAGAATCCGATTTTGATCCTCCAAACCCTAACCCTAATTCTAATATTTTCCCTTCTTCCCCCTTATTCTCCGACCCTTTCTCTCTCTACGGCGACCCCTTCTTCTCCTCCGCCCCCACCACCACCACCACCGCCAGTCGGGGCCCGGTTATCTTCTCTTCCACAACTATTGACCTCGAAAACCCTAGAAACTTCTCCAACCTCTTTCCTTCTTCTCCTTCTCCTGTTGCTTTTAATCCCTTCGATTTTCTTCAAACTCATCTCCAGAACCTCAGAGCTAGTGGCGCTAATGTTCAATTTGTTGTTGATAATCATCCTTTTGAAGGTACTGGTGCTGCTGGTGGGTTTCGATTGCCGCCCAATATTGGGGATTATTTTCTTGGGCCGGGTTTGGAGCAATTGATCCAGCAGCTCGCTGAGAATGACCCGAATCGGTATGGTACTCCGCCTGCTTCGAAACGGGCTGTTCAGGGGTTGCCTGTTGTGGTGGTTTCTGATGAGGTGGTGGGGTCGGAGTCGAACTCATGTGCGGTTTGTATGAATGATTTCGAGGTCGGGTTGAAGGCCAAACAGATGCCTTGTAAGCATTTGTATCATTCGGATTGTTTGTTGCCTTGGCTTGAGCTTCATAATTCGTGCCCTGTTTGTCGGTTTGAGTTGCCTACTGATGACCCTGATTATGAGAACCGAAGGGCCAACCGAGGGCAAAGAGGATCGAGTGGCGGTGGCGGTGGTGAGGGTGGAGGTCAGGGAGGTTCACAAGGGGGTGGAGGTCAAAGTGTGGAAAGGAGGTTTAGGATTTCGTTGCCTTGGCCTTTTAGCACATTCGTCGCGCCTGGTGATGGTGGTGATAATAATAACAGTAATAGTGGGTCGAGCTCTGGGGGTCAGCAAAGTGGGGGTCGCGGTGGTTCTTCCGGGCCTATGGAAGGGTTGGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68032.p1 GENE.S_Transcript_68032~~S_Transcript_68032.p1 ORF type:complete len:357 (+),score=62.58,zinc_ribbon_9|PF14369.2|4e-15,zinc_ribbon_9|PF14369.2|2.9e+03,zinc_ribbon_9|PF14369.2|4.8e+03,zf-RING_2|PF13639.2|75,zf-RING_2|PF13639.2|2.4e-12,zf-RING_11|PF17123.1|5.3e-08,zf-C3HC4_2|PF13923.2|2.1e+02,zf-C3HC4_2|PF13923.2|6.2e-06,zf-C3HC4|PF00097.21|14,zf-C3HC4|PF00097.21|9.8e-06 S_Transcript_68032:156-1226(+)
MSSAGVTIATPQSYFCYQCNRTVTLTPLPNSDLSCPDCNGGFLEESDFDPPNPNPNSNIFPSSPLFSDPFSLYGDPFFSSAPTTTTTASRGPVIFSSTTIDLENPRNFSNLFPSSPSPVAFNPFDFLQTHLQNLRASGANVQFVVDNHPFEGTGAAGGFRLPPNIGDYFLGPGLEQLIQQLAENDPNRYGTPPASKRAVQGLPVVVVSDEVVGSESNSCAVCMNDFEVGLKAKQMPCKHLYHSDCLLPWLELHNSCPVCRFELPTDDPDYENRRANRGQRGSSGGGGGEGGGQGGSQGGGGQSVERRFRISLPWPFSTFVAPGDGGDNNNSNSGSSSGGQQSGGRGGSSGPMEGLD*

Click here to download the sequence:
Link to NCBI Protein BLAST