Transcript Information: S_Transcript_68044.p1


Annotated TAIR IDAT4G36960.1
Annotated Gene NameRNA-binding (RRM/RBD/RNP motifs) family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:17427349-17429589 | Forward length=379
E-Value8.9E-192
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 187.124126948691
Replicate 289.915111632442
Replicate 386.752982024535
Condition 2: 8 Hour
Replicate 199.061799154727
Replicate 283.738204405681
Replicate 385.858805157495
Condition 3: 24 Hour
Replicate 187.806668555768
Replicate 278.373739473514
Replicate 372.143501315192


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68044.p1 GENE.S_Transcript_68044~~S_Transcript_68044.p1 ORF type:complete len:358 (+),score=85.34,RRM_1|PF00076.18|9.1e-14,RRM_1|PF00076.18|6.9e-12,RRM_1|PF00076.18|2.3e-12,RRM_6|PF14259.2|6.4e-12,RRM_6|PF14259.2|3.1e-09,RRM_6|PF14259.2|1.9e-10,RRM_5|PF13893.2|7.3e-06,RRM_5|PF13893.2|0.024,RRM_5|PF13893.2|0.2,RRM_7|PF16367.1|0.0092,RRM_7|PF16367.1|0.025,RRM_7|PF16367.1|0.0096,Nup35_RRM_2|PF14605.2|7.5,Nup35_RRM_2|PF14605.2|0.046,Nup35_RRM_2|PF14605.2|0.1 S_Transcript_68044:758-1831(+)
ATGGAGCGAAAGCTTGTGGTTCTTGGTATCCCATGGGATGTAGACACCAATGGTTTGAAGGAATACATGTGTAAATTTGGTGAATTGGAGGACTGTGTTGTAATGAAGGAACGGAATACTGGCAGATCACGTGGCTTTGGTTATGTCACATTTGTCTCTGATGAGGATGCTAAGAAAGCATTATCGAGTGAGCATCTCCTTGGCAACAGGGTGTTGGAAGTAAAAGTTGCTACACCAAAGGAAGAGATGATGAGGTCATCTACAAAAAAGATCACCCGGATATTTGTGGCCAGGATTGCGCCGTCTGTCACTGAATCTACATTCCGCAGCCATTTTGAGAAGTATGGAGAGATAACTGATCTTTACATGCCTAAAGATCCAGCTACAAAAGGTCATCGTGGCATTGGATTTATTACTTTTGCTAGTGCAGACTCTGTGGACAACCTGATGAAGGACGCTCATGAGTTGGAAGGTTCTACTGTAGTAGTTGATCGAGCTACACCCAAGGAAGATGATTATCGCCCATATAATAGAGGATCACATGGTGGTTATGGTGCTTACAATGCTTATATTAGTGCTGCTACAAGATATGCTGCATTAGGTGCTCCTACCTTGTATGATCATCCAGGTTCTTATTATGGAAGGGATCCAATCAGGGGAGTTGGTAGAAAGATATTTGTTGGAAGACTTCCTCAGGAGGCGACTGCAGAAGATCTCCGCATTTATTTTGGCAGATTTGGTCGCATTTTGGATGTTTATATTCCAAAGGATCCTAAGAGATCTGGACATCGTGGTTTTGGCTTTGTAACTTTCGCTGAAGATGGTGTTGCAGACCGAGTGGCTAGACGGTCACATGAGATATTGGGACAACCGGTTGCCATAGACTCTGCTACTCCAGTTGACGAAGCTGGTCCTAGTGGAGGTCTCATGATGGACAATCCTGAGCCTTATGGTAGTTATGGTCCAATTCGTGCATATAGCAGAATGTATGGAAGCCTGGATTTCGATGATTGGGGTTATGGTATGAGCAGTTCAAGGCCTTCCAGATCAGATTGGAGGTACAGGCCATACTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68044.p1 GENE.S_Transcript_68044~~S_Transcript_68044.p1 ORF type:complete len:358 (+),score=85.34,RRM_1|PF00076.18|9.1e-14,RRM_1|PF00076.18|6.9e-12,RRM_1|PF00076.18|2.3e-12,RRM_6|PF14259.2|6.4e-12,RRM_6|PF14259.2|3.1e-09,RRM_6|PF14259.2|1.9e-10,RRM_5|PF13893.2|7.3e-06,RRM_5|PF13893.2|0.024,RRM_5|PF13893.2|0.2,RRM_7|PF16367.1|0.0092,RRM_7|PF16367.1|0.025,RRM_7|PF16367.1|0.0096,Nup35_RRM_2|PF14605.2|7.5,Nup35_RRM_2|PF14605.2|0.046,Nup35_RRM_2|PF14605.2|0.1 S_Transcript_68044:758-1831(+)
MERKLVVLGIPWDVDTNGLKEYMCKFGELEDCVVMKERNTGRSRGFGYVTFVSDEDAKKALSSEHLLGNRVLEVKVATPKEEMMRSSTKKITRIFVARIAPSVTESTFRSHFEKYGEITDLYMPKDPATKGHRGIGFITFASADSVDNLMKDAHELEGSTVVVDRATPKEDDYRPYNRGSHGGYGAYNAYISAATRYAALGAPTLYDHPGSYYGRDPIRGVGRKIFVGRLPQEATAEDLRIYFGRFGRILDVYIPKDPKRSGHRGFGFVTFAEDGVADRVARRSHEILGQPVAIDSATPVDEAGPSGGLMMDNPEPYGSYGPIRAYSRMYGSLDFDDWGYGMSSSRPSRSDWRYRPY*

Click here to download the sequence:
Link to NCBI Protein BLAST