Transcript Information: S_Transcript_68079.p1


Annotated TAIR IDAT5G01950.1
Annotated Gene NameLeucine-rich repeat protein kinase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:365040-369532 | Reverse length=951
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 16.7660172631815
Replicate 26.0298725697445
Replicate 35.9391861964137
Condition 2: 8 Hour
Replicate 112.424750714431
Replicate 211.920593078159
Replicate 311.199852131431
Condition 3: 24 Hour
Replicate 15.4843616390581
Replicate 25.2338039445378
Replicate 35.6909909515781


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68079.p1 GENE.S_Transcript_68079~~S_Transcript_68079.p1 ORF type:complete len:944 (+),score=151.18,Pkinase|PF00069.21|2.3e-48,Pkinase_Tyr|PF07714.13|3e-47,LRR_8|PF13855.2|0.002,LRR_8|PF13855.2|5.5e-06,LRR_8|PF13855.2|0.021,LRR_8|PF13855.2|6.2e-06,LRR_8|PF13855.2|4.3e+02,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|1.6,LRR_4|PF12799.3|0.019,LRR_4|PF12799.3|0.027,LRR_4|PF12799.3|0.67,LRR_4|PF12799.3|0.00067,LRR_4|PF12799.3|4.2e+03,LRRNT_2|PF08263.8|7.5e-08,LRRNT_2|PF08263.8|5.4e+03 S_Transcript_68079:230-3061(+)
ATGGTTGGGTATAGAGCTTTACTCTTGGTATGGTACCTATGCTTCTGCCTCAAACTTCAAGATGTTGTTGCACAAACTACCCATCCTGCTGAAGTCTCAGCATTACACGCAGTCAGGAGGAGACTTATTGATCCAAAGAGGCACTTGGCAAGCTGGAAAAGTGGAGATCCATGTACAGATAATTGGAATGGTGTTTTTTGCAATAACACAGTTGATGCTGATGGATATTTCCACGTTGAAGCCATCCAACTTATATACAAGAATCTCTCAGGAACTTTAGCACCTGAGATTGGGCAACTGTCTCATCTGAAGCTACTAGACTTCATGTGGAATAAAATATCTGGTGACATCCCAAAGGAGATTGGGAATCTTGCATCTTTGGAAATACTGGTTTTAAATGGGAACAAATTGTCAGGTACTATGCCTGATGAACTGGGCTTGCTCTCAAAACTGCTTAGACTTCAACTGGACGAGAATTATTTATCTGGAACCATACCCAAGTCCTTTGCCAACATGATCAAGATTGAACATTTCCATTTGAACAATAACTCCCTCAGTGGGCAGCTTCCTCCTGAGCTTTCTCAGTTACCCAATCTTGTGCACCTGCTGGCGGATAACAACAACTTATCTGGAGTTCTTCCTCCTGAGTATTCAACTTTACCAAAATTGGAAATACTCCAGCTCGACAATAATCATTTTGTTGGTTCCGAAATTCCAAAATCCTATCAAAATTTCTCCAGATTGGTGAAGTTAAGTCTCCGAAATTCTAGCTTGGGGGGAGCAGTTCCTGATTTTAGCAAGATTGTAAATTTTAGTTATATAGATCTGAGTTGGAATGAGTTGACAGGGACAATTCCTTCAAACAAGCTGTCAGATAAGATGATAACAATTGACTTGTCCAACAACAGGCTGAGTGGATCAATTCCTGAAAGTTTCTCTAATCTTACATCTCTACAGATGTTGTCACTTGAAAACAATACATTGAATGGTTCTATCCCTGCTAGCATTTGGCAGGACAAATTCTTTAATGCTACTGCTAGACTCTCAGTTGATCTTCGATACAATTTGTTTTCTGACATTTCTGGGGATCTTAATCCTCCCAAAAATGTGACCCTCAGGCTTCGAGGCAATCCTGTCTGTGACCGTGCCAACATAGAGAATGTACGCCATTTCTGTGATTCAGATGCAGGGGCAAATGGGAAATTTGAAGTCTTAACAAATTCATCAGCAACTGCTTGTCCTAGACGTGCATGTCCTGTGTCAGGATATTATGAATATGTTCCTGCAGCTCCAGAATGCTTTTGTGCTGCTCCTATTGGAATAGGATATAGACTGAAGAGTCCTAGTTTTGTTTATTTCCCTCCATACAAATTTGCTTTCGAATCTTACATCACTCACTCGTCAAATATGGATCTATATCAACTCGTCATTGACTCATATGCCTGGGAAGAAGGACCTCGTCTACGGATGTATTTGAAAATCTTTCCAGATATCAATGGTAATAATTCTTTCAATGATACTCAGCTTCGCCGGATTCTTCGTAAATATGCAACATGGGATTTTCCTGGTAGTGAGCTTTTTGGACCATATGAACTTCTGAACTTCACTCTTCAGGGACCTTATAGCTCCGTGGATCTCGATACTGGTAACAGTGGCATAGGCAAGGGTCTTTTGGCTGGCATTTTGGTAGCTGCAGTTATTTGTGCTGTTACTGTATCTGTGGCAGTCACATTTCTCATCATGAGAAGGAAAAGAAGATTCCAGCAAACGTCAAAAAAGAACTTATCCTCAATAATATCAGGAAAAATTGAAGGTGTCAAAGAGTTCACCTTCAAAGAATTATCACATGGCACTGACAATTTTAGTAGTTCAACTAAAGTTGGTCAAGGAGGATATGGGAAGGTCTATAGGGGTGTTTTAGCTGATAAGGTTATAGTAGCTATTAAGCGTGCAGAGGAGGGGTCGCTCCAGGGATCACGTGAATTTCTAACAGAGATACAGCTTTTGTCAAGGTTACATCATCGGAACTTGGTCTCACTGCTAGGATATTGTGGTGAGAATGGTGAACAGATGCTTGTCTACGAATATATGCCAAATGGTACTTTACGGGACTGGCTTTCTGGTAAATCAAATAGGTCTCTGAACTTCGTCATGAGGTTACGCATCGCATTAGGTGCAGCCAAGGGCATCCTTTACCTGCATACTGAAGCAAACCCACCAATATTTCATCGTGATATTAAAGCTAGTAACATACTTCTGGATTCCAATCTTGTTGCAAAGGTTGCTGATTTTGGATTGTCACGTCTTGCTCCAGTAGAGGACAATGAAGGGAACTTACCACATCACGTGTCCACGGTTGTGAAGGGAACACCAGGATACCTTGACCCTGAATACTTCTTGACTCATAAGCTGACAGACAAAAGTGATGTATACAGTTTAGGAGTTGTGTTTCTAGAGCTTCTCACTGGTGTACCACCGATATCACATGGAAAAAATCTAGTCCGTGAGGTACATGCGGCTTATCAATCAGGGTCACTGTTCGGCATTATAGACGACAAAATGGGTGCTTACCCATCAGAATGTTTAGAGAGATTCATTGCTTTGGCAGTGAGATGCTGTCAGGATAAACCAGAGATGAGACCTTCTATGTTAGATGTGGTAAGGGAGCTGGAGAACATGCTCCAAATGCTTCCTGATAGCATGAACATGTCTGACACGACATCTGTGTCATCGACATCTTTAAACAATGTCTCCAAGTATGCGCGTATGTCATCTGATGTGTCTGGAAGTGATTTAAACACTACTGTCATTCCCACCATTACACCACGTTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68079.p1 GENE.S_Transcript_68079~~S_Transcript_68079.p1 ORF type:complete len:944 (+),score=151.18,Pkinase|PF00069.21|2.3e-48,Pkinase_Tyr|PF07714.13|3e-47,LRR_8|PF13855.2|0.002,LRR_8|PF13855.2|5.5e-06,LRR_8|PF13855.2|0.021,LRR_8|PF13855.2|6.2e-06,LRR_8|PF13855.2|4.3e+02,LRR_4|PF12799.3|2.5e+02,LRR_4|PF12799.3|1.6,LRR_4|PF12799.3|0.019,LRR_4|PF12799.3|0.027,LRR_4|PF12799.3|0.67,LRR_4|PF12799.3|0.00067,LRR_4|PF12799.3|4.2e+03,LRRNT_2|PF08263.8|7.5e-08,LRRNT_2|PF08263.8|5.4e+03 S_Transcript_68079:230-3061(+)
MVGYRALLLVWYLCFCLKLQDVVAQTTHPAEVSALHAVRRRLIDPKRHLASWKSGDPCTDNWNGVFCNNTVDADGYFHVEAIQLIYKNLSGTLAPEIGQLSHLKLLDFMWNKISGDIPKEIGNLASLEILVLNGNKLSGTMPDELGLLSKLLRLQLDENYLSGTIPKSFANMIKIEHFHLNNNSLSGQLPPELSQLPNLVHLLADNNNLSGVLPPEYSTLPKLEILQLDNNHFVGSEIPKSYQNFSRLVKLSLRNSSLGGAVPDFSKIVNFSYIDLSWNELTGTIPSNKLSDKMITIDLSNNRLSGSIPESFSNLTSLQMLSLENNTLNGSIPASIWQDKFFNATARLSVDLRYNLFSDISGDLNPPKNVTLRLRGNPVCDRANIENVRHFCDSDAGANGKFEVLTNSSATACPRRACPVSGYYEYVPAAPECFCAAPIGIGYRLKSPSFVYFPPYKFAFESYITHSSNMDLYQLVIDSYAWEEGPRLRMYLKIFPDINGNNSFNDTQLRRILRKYATWDFPGSELFGPYELLNFTLQGPYSSVDLDTGNSGIGKGLLAGILVAAVICAVTVSVAVTFLIMRRKRRFQQTSKKNLSSIISGKIEGVKEFTFKELSHGTDNFSSSTKVGQGGYGKVYRGVLADKVIVAIKRAEEGSLQGSREFLTEIQLLSRLHHRNLVSLLGYCGENGEQMLVYEYMPNGTLRDWLSGKSNRSLNFVMRLRIALGAAKGILYLHTEANPPIFHRDIKASNILLDSNLVAKVADFGLSRLAPVEDNEGNLPHHVSTVVKGTPGYLDPEYFLTHKLTDKSDVYSLGVVFLELLTGVPPISHGKNLVREVHAAYQSGSLFGIIDDKMGAYPSECLERFIALAVRCCQDKPEMRPSMLDVVRELENMLQMLPDSMNMSDTTSVSSTSLNNVSKYARMSSDVSGSDLNTTVIPTITPR*

Click here to download the sequence:
Link to NCBI Protein BLAST