Transcript Information: S_Transcript_68196.p1


Annotated TAIR IDAT5G16160.1
Annotated Gene Nameunknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:5275813-5276576 | Reverse length=133
E-Value0.0001
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.1522440819548
Replicate 27.3082990409268
Replicate 37.9534299360527
Condition 2: 8 Hour
Replicate 111.462397295459
Replicate 212.024868643853
Replicate 37.4605466617435
Condition 3: 24 Hour
Replicate 14.6420377417513
Replicate 24.8160599599738
Replicate 36.1478733237471


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68196.p1 GENE.S_Transcript_68196~~S_Transcript_68196.p1 ORF type:5prime_partial len:160 (+),score=30.01 S_Transcript_68196:2-481(+)
TATCATTCGCTGACTAGGATACGATGTAAACGTTTCTGTACGGCAGGAATAAGGAATTCTGAGGTTTCGTGGAGAGAGAGAATGGAGGAAAATAAGAAAAGAGAAGCAGCAGCTATGGCATCAAACTCCTGTCCAAGACCCCATCTCAAATCTGGTGGTGTCACCCAAGATCAGCTCAGTAAATTCCGAGAATTGCAAAGGAGACGGTTACAATTGTCATCGAAATCGAAGAACAAAAGGAAGTCCAAAGGTTCATCTGAAGCTAAAATCAAACTTACAGGTGAGGATCTTGATATGAAAGGCTCTCTGGATGAAAATACAGCTCAGGAATTGACAGATTCAAGTGTTAGCGACAGCTCAACAACCACTAAAACGTCAGCCTCATCTCCCCAAGTTGATGTGCATCCTGCATTGAAGAAAAAAAAGTTGCATTGGGGGCTAGACACAAAGGAAAGGTGGGAAAGAAAAGCCAACATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68196.p1 GENE.S_Transcript_68196~~S_Transcript_68196.p1 ORF type:5prime_partial len:160 (+),score=30.01 S_Transcript_68196:2-481(+)
YHSLTRIRCKRFCTAGIRNSEVSWRERMEENKKREAAAMASNSCPRPHLKSGGVTQDQLSKFRELQRRRLQLSSKSKNKRKSKGSSEAKIKLTGEDLDMKGSLDENTAQELTDSSVSDSSTTTKTSASSPQVDVHPALKKKKLHWGLDTKERWERKANM*

Click here to download the sequence:
Link to NCBI Protein BLAST