Transcript Information: S_Transcript_68258.p1


Annotated TAIR IDAT1G15215.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5238096-5239770 | Forward length=258
E-Value3E-39
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4355002058634
Replicate 27.5840839103957
Replicate 35.1870195235127
Condition 2: 8 Hour
Replicate 110.884834641037
Replicate 29.3216035998861
Replicate 311.546084119365
Condition 3: 24 Hour
Replicate 110.012238266522
Replicate 210.387580305826
Replicate 35.5173222136191


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68258.p1 GENE.S_Transcript_68258~~S_Transcript_68258.p1 ORF type:5prime_partial len:96 (+),score=21.16,SAWADEE|PF16719.1|1.5e-28 S_Transcript_68258:3-290(+)
GCTCGTGTGCGGTTTGCTGGTTTTGGCAACTCCCATGACGAATGGGTGAATGTAAGGCATGGCATACGTGAGCGTTCAGTTCCCCTGGAACCTTCAGAATGCCATAAGGTCAAGGTTGGTGACCTCGTGCTATGCTTCCAGGAAAGACCAGATTATGCTGTATATGTTGATGCACATGTCATGGAAATCCAAAGGAGATTGCATGACATAAAGGGATGTAGATGCATCTTTGTGGTTCGGTTTGATGACGATAAGACAGAGGTAAATATTCTTCATTTCCTTGATTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68258.p1 GENE.S_Transcript_68258~~S_Transcript_68258.p1 ORF type:5prime_partial len:96 (+),score=21.16,SAWADEE|PF16719.1|1.5e-28 S_Transcript_68258:3-290(+)
ARVRFAGFGNSHDEWVNVRHGIRERSVPLEPSECHKVKVGDLVLCFQERPDYAVYVDAHVMEIQRRLHDIKGCRCIFVVRFDDDKTEVNILHFLD*

Click here to download the sequence:
Link to NCBI Protein BLAST