Transcript Information: S_Transcript_68259.p1


Annotated TAIR IDAT1G15215.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5238096-5239770 | Forward length=258
E-Value3.4E-44
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1079604938757
Replicate 21.7475476877239
Replicate 32.373817515711
Condition 2: 8 Hour
Replicate 12.7448522190369
Replicate 24.2085655856911
Replicate 33.3767679374228
Condition 3: 24 Hour
Replicate 12.5954317018528
Replicate 22.4683359142557
Replicate 30.49944642386368


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68259.p1 GENE.S_Transcript_68259~~S_Transcript_68259.p1 ORF type:5prime_partial len:101 (+),score=21.68,SAWADEE|PF16719.1|6.7e-31 S_Transcript_68259:3-305(+)
GCTCGTGTGCGGTTTGCTGGTTTTGGCAACTCCCATGACGAATGGGTGAATGTAAGGCATGGCATACGTGAGCGTTCAGTTCCCCTGGAACCTTCAGAATGCCATAAGGTCAAGGTTGGTGACCTCGTGCTATGCTTCCAGGAAAGACCAGATTATGCTGTATATGTTGATGCACATGTCATGGAAATCCAAAGGAGATTGCATGACATAAAGGGATGTAGATGCATCTTCGTGGTTCGGTTTGATGAAGATAAGACGGAGGAGAAGGTCCAGCTGAACAAAATATGTTGTAGGCCCAAATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68259.p1 GENE.S_Transcript_68259~~S_Transcript_68259.p1 ORF type:5prime_partial len:101 (+),score=21.68,SAWADEE|PF16719.1|6.7e-31 S_Transcript_68259:3-305(+)
ARVRFAGFGNSHDEWVNVRHGIRERSVPLEPSECHKVKVGDLVLCFQERPDYAVYVDAHVMEIQRRLHDIKGCRCIFVVRFDEDKTEEKVQLNKICCRPK*

Click here to download the sequence:
Link to NCBI Protein BLAST