Transcript Information: S_Transcript_68260.p1


Annotated TAIR IDAT1G15215.2
Annotated Gene NameBEST Arabidopsis thaliana protein match is: sequence-specific DNA binding transcription factors;sequence-specific DNA binding (TAIR:AT3G18380.1); Has 89 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 89; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:5238096-5239770 | Forward length=258
E-Value9.6E-72
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.7162299022099
Replicate 24.3728051375255
Replicate 33.9045432249064
Condition 2: 8 Hour
Replicate 16.9163428055567
Replicate 26.1472196712762
Replicate 37.0092652034398
Condition 3: 24 Hour
Replicate 14.4280169237691
Replicate 25.1044620667449
Replicate 36.2487046949612


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68260.p1 GENE.S_Transcript_68260~~S_Transcript_68260.p1 ORF type:3prime_partial len:222 (+),score=49.91,SAWADEE|PF16719.1|1.5e+03,SAWADEE|PF16719.1|3.5e-34 S_Transcript_68260:133-795(+)
ATGATACAACCAACAACAGTGGAAGCCACTTCACTTCAAGCTGAACAACTTATGGAGTCCACTCCCTCAGTATTCTCTGATTCTGAGATTGCAGAGATGGAGAATTTATTCAGGGATGTAGGAAAGGATTCACTTAATCAGGAATTCTGCCAAGAACTTGCAACAACTTTTAGTTCCTCCTTATGTCGCGTTGGAAAACCAACTATCAGCTGGCAACAGGTGCAAAGCTGGTTTCAAGAAAAACAAAAAGATTTATATGCATTGGACGCTTGTACTCCAAGGAAAATGCCCGAGACTTCTATCGTGCTTAAAGGTCGAACAGCAGCTGATGAACTCGCAGAATTGGCTTTTGAGGCCAAATCTTCAAGGGACAATGCATGGTATGATGTTGCTGCATTTCTTAACCATAGAGTTCTTAGTACTGGAGAACTTGAGGCTCGTGTGCGGTTTGCTGGTTTTGGCAACTCCCATGACGAATGGGTGAATGTAAGGCATGGCATACGTGAGCGTTCAGTTCCCCTGGAACCTTCAGAATGCCATAAGGTCAAGGTTGGTGACCTCGTGCTATGCTTCCAGGAAAGACCAGATTATGCTGTATATGTTGATGCACATGTCATGGAAATCCAAAGGAGATTGCATGACATAAAGGGATGTAGATGCATC

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68260.p1 GENE.S_Transcript_68260~~S_Transcript_68260.p1 ORF type:3prime_partial len:222 (+),score=49.91,SAWADEE|PF16719.1|1.5e+03,SAWADEE|PF16719.1|3.5e-34 S_Transcript_68260:133-795(+)
MIQPTTVEATSLQAEQLMESTPSVFSDSEIAEMENLFRDVGKDSLNQEFCQELATTFSSSLCRVGKPTISWQQVQSWFQEKQKDLYALDACTPRKMPETSIVLKGRTAADELAELAFEAKSSRDNAWYDVAAFLNHRVLSTGELEARVRFAGFGNSHDEWVNVRHGIRERSVPLEPSECHKVKVGDLVLCFQERPDYAVYVDAHVMEIQRRLHDIKGCRCI

Click here to download the sequence:
Link to NCBI Protein BLAST