Transcript Information: S_Transcript_6834.p1


Annotated TAIR IDAT2G25580.1
Annotated Gene NameTetratricopeptide repeat (TPR)-like superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr2:10888102-10889949 | Forward length=615
E-Value6.6E-148
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.241980568183
Replicate 211.730049781412
Replicate 313.893527849646
Condition 2: 8 Hour
Replicate 115.141027125164
Replicate 214.541701615822
Replicate 313.926353768588
Condition 3: 24 Hour
Replicate 110.776809188693
Replicate 27.743468955252
Replicate 38.9538257638162


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6834.p1 GENE.S_Transcript_6834~~S_Transcript_6834.p1 ORF type:complete len:600 (+),score=110.78,DYW_deaminase|PF14432.2|1.4e-36,PPR_2|PF13041.2|0.28,PPR_2|PF13041.2|0.00022,PPR_2|PF13041.2|8.8e-06,PPR_2|PF13041.2|59,PPR_2|PF13041.2|1.4e+04,PPR|PF01535.16|39,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.00014,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.9,PPR|PF01535.16|2.5e+03,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.0095,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|0.21,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|71 S_Transcript_6834:229-2028(+)
ATGAAACGGTATCATTATCCTCTTTTCATCTTCAGACGGTTTCATACTCGATGTTTAGACCCTAAGATCAGTTGGCATAATGGGGCTGCAACCTATCATGTACTTAATGGAAGATCAGTGGTATTGAGACAATATTCAAGTGGATTTGCTGGTGTAAATAGGGTTCCGGAAAATTTTGATGATATTGATTCAGTTGGGGTTGGCAAAGTCGCCCCAACTATTAGTGATATTCATCAACAGGGCTACAGCCAGAATTTTGGACAGTTTCAGCATCAGTCTAGCCCGAGAAATCACTATGCGAATGATTGGACATGTCAACAAAATTTTGGTAACCATTCGATGGCGAACGTTGGATCAAATGACCTGTCTAGAGGGAATAATAAAGTAGCAGGGAATCCTGGTGGTTATCAACAAGATGTTTCGGGTACTCCATTGAGTTCAAATGGTTTTCATCAAGCGAATCCTGGTGGTCATCTGGGTAATTCTAGTGGATTCTATAATGTTCATTCAGGACCTCATCACCAGAACTTTATTGGATCTCACAATGCTCAAGTCCTTACGGAATCACCGTTGAGCACTCCTTATAATGGGGTTTCAGCAAATGATGTTGGTAAAAATGTCGAGGGCATGCTGGAGGAGTTTGATACATACTGTAAGGAGTGGGATCTTGAAAATGCTGTGAACTCCATGAGAATGATGGGTGAGAAGAGAGTTCATATAGATTTACCTCGGTACTTGATTCTAATTAAAGCATGTGGGGAGGCAAAAGCTTCGAAAGAAGCAAAGGTTGTGCATGAGCATCTCATTAAATTCATGTCTCCTATCACAGTTAGCACTTTTAACCGGATTCTTGAGATGTATGGTAAATGTGGGTTAATGGAGGATGCATATAGTACATTTAACCAAATGCCTGAGCGCAATTTAACATCTTGGGACACTATGATTTCATGGTTTGCAAGAAATGGTCTCGGAGAGGAGGCGATTGATGTGTTCACTCGATTTAAGGAGTCTGGACTGAAACCAGATGGCCAAATGTTCTTTGGGGTATTTGATGCTTGTGCTGTCCTCGGTGATGTCACAGAGGGAATGTTGCATTTTGAGTCAATGAGCAAGACATATGGCATCGTTCCATCCATGGCTCACTATGCCAGCATAGTACAAATGTTTGGTAGTGCAGGTTATCTGGATGGAGCTTTAGAGTTCATTGAGAGTATGCCTGTGGAGCCAAGTATAGAGGTCTGGGAAAGCCTAATGAACATATCCAGGGTCCAAGGGAACATAGAACTTGGTGATCGTTGTGCACAGATTGTGGAGCAGCTGGACCCTTCTCGCATGAGTAAAGACTCGAAGGCTGGACTCCTGCCAGTTAAAGATTCAGATACTCTGAAGAAGAAAGTAAAGAAAGCAAACCCTTTGGAGCATACAAAACATGAGTACAGAGCAGGTGATAGATCTCATCCAGAAAATGACAAGATTTATGCAATTTTGAGGGGAATGAAAGAATCAATGAAAGAGGCTGGTTATATACCAGAAACTAGGTTTGTTCTTCATGATATTGACCCAGAGGGCAAAGAGGAAGCTATTATGGCTCATAGTGAGAGACTTGCTTGCACCTATGCCCTTATTACCAGTGCTGCCCGTATGCCAATTCGTATAATTAAGAACCTTCGTGTTTGTGGTGATTGCCACAATGCATTTAAGATCATTTCAAAGCTCGTTGGTAGGGAGGTTATTATGAGAGATGCCAAGAGGTTTCACCATTTTAAAGATGGAAAATGTTCCTGCAATGACTATTGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6834.p1 GENE.S_Transcript_6834~~S_Transcript_6834.p1 ORF type:complete len:600 (+),score=110.78,DYW_deaminase|PF14432.2|1.4e-36,PPR_2|PF13041.2|0.28,PPR_2|PF13041.2|0.00022,PPR_2|PF13041.2|8.8e-06,PPR_2|PF13041.2|59,PPR_2|PF13041.2|1.4e+04,PPR|PF01535.16|39,PPR|PF01535.16|1.7e+02,PPR|PF01535.16|0.00014,PPR|PF01535.16|2.9e-05,PPR|PF01535.16|1.5e+02,PPR|PF01535.16|1.9,PPR|PF01535.16|2.5e+03,PPR_1|PF12854.3|4.6e+02,PPR_1|PF12854.3|0.0095,PPR_1|PF12854.3|1.3,PPR_1|PF12854.3|0.21,PPR_3|PF13812.2|1.9e+02,PPR_3|PF13812.2|0.063,PPR_3|PF13812.2|0.078,PPR_3|PF13812.2|1.4e+03,PPR_3|PF13812.2|71 S_Transcript_6834:229-2028(+)
MKRYHYPLFIFRRFHTRCLDPKISWHNGAATYHVLNGRSVVLRQYSSGFAGVNRVPENFDDIDSVGVGKVAPTISDIHQQGYSQNFGQFQHQSSPRNHYANDWTCQQNFGNHSMANVGSNDLSRGNNKVAGNPGGYQQDVSGTPLSSNGFHQANPGGHLGNSSGFYNVHSGPHHQNFIGSHNAQVLTESPLSTPYNGVSANDVGKNVEGMLEEFDTYCKEWDLENAVNSMRMMGEKRVHIDLPRYLILIKACGEAKASKEAKVVHEHLIKFMSPITVSTFNRILEMYGKCGLMEDAYSTFNQMPERNLTSWDTMISWFARNGLGEEAIDVFTRFKESGLKPDGQMFFGVFDACAVLGDVTEGMLHFESMSKTYGIVPSMAHYASIVQMFGSAGYLDGALEFIESMPVEPSIEVWESLMNISRVQGNIELGDRCAQIVEQLDPSRMSKDSKAGLLPVKDSDTLKKKVKKANPLEHTKHEYRAGDRSHPENDKIYAILRGMKESMKEAGYIPETRFVLHDIDPEGKEEAIMAHSERLACTYALITSAARMPIRIIKNLRVCGDCHNAFKIISKLVGREVIMRDAKRFHHFKDGKCSCNDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST