Transcript Information: S_Transcript_68639.p1


Annotated TAIR IDAT5G52110.1
Annotated Gene NameProtein of unknown function (DUF2930)
Annotated Gene Symbol(s)HCF208, CCB2
Annotation TypeHomolog
Chromosome Positionchr5:21172653-21173953 | Reverse length=275
E-Value2E-53
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.0672611593089
Replicate 22.3932517486118
Replicate 34.1261714627716
Condition 2: 8 Hour
Replicate 14.1927886047245
Replicate 24.1710226277456
Replicate 34.7689692946738
Condition 3: 24 Hour
Replicate 14.1468253405874
Replicate 21.306050158637
Replicate 33.4199382244225


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68639.p1 GENE.S_Transcript_68639~~S_Transcript_68639.p1 ORF type:5prime_partial len:295 (+),score=33.35,DUF2930|PF11152.4|4.3e-38 S_Transcript_68639:1-885(+)
TTCACAACGTCAGCAAACATCATCATTTCACACATTGTCATAAGTACTCCACATAACTTTGAACGGAAGCGTTCAATTGGTAAAACTTTCATTCCGGTTTCCCCAAACAATAAAATGAACACACTTCCCTTAAATCAGTTATTGCCGTTAACCCTAGAATTCCCATTTCGCGCCAACTGTTCTCATCAATTTCATCATGCTACCCCTCTCAACACCAGAAGAATTCCAAGAAAACCTTTGCAATTTTATGCTCAAATTGATGAATCTTCAAAACCCACTAGCACTCAGGACCAAGTTAACCTCTCCGTTCTTCGCTTCACTTTTGGAATATCTTGGTTAGATGAATCTTACTTGCCCAGATGGATTGGGTACGGTTTCGGATTTCTCATTGTTTTGAACCATCTTGTGGGTTCAAGTTCTTCTGTGTCCTCAGCTCAGCTTGTATCAGAGGCTTTGGGTCTTTCGTTAGCAGCTTTCTCTGTCACCCTCCCATTTGTGGGAAGATTTCTTGAGGGAGCTACTGGAGAGGAGGTCACAAGTCTCCCTGAACAAGCACAACAAATTTTTGTGATGTCAAAAAATGTTGCAGATACAATGAGGGAGGACCTGGCTTGGGCGACTTATATTCTACTTCGAAATACGAAATCGATGTCAGTTCTCATATCTCTGCAAGATGTAATATGTGTGCGTGGCTATTGGAACACACCAGAAAGTTTATCAAAGGATGATATTCTTGACTGGTTTATAGGCCAAATCAAGAATTTTGGGCTGTCTGATGTGAAAGAGTCACTCTATTTTCCACAAAGCACAGGTGAGTATATTGCTAATATTATTGCTACATTTTGGAGTATGTTCTCTTACTCAAGAAACCACAGACTTATGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68639.p1 GENE.S_Transcript_68639~~S_Transcript_68639.p1 ORF type:5prime_partial len:295 (+),score=33.35,DUF2930|PF11152.4|4.3e-38 S_Transcript_68639:1-885(+)
FTTSANIIISHIVISTPHNFERKRSIGKTFIPVSPNNKMNTLPLNQLLPLTLEFPFRANCSHQFHHATPLNTRRIPRKPLQFYAQIDESSKPTSTQDQVNLSVLRFTFGISWLDESYLPRWIGYGFGFLIVLNHLVGSSSSVSSAQLVSEALGLSLAAFSVTLPFVGRFLEGATGEEVTSLPEQAQQIFVMSKNVADTMREDLAWATYILLRNTKSMSVLISLQDVICVRGYWNTPESLSKDDILDWFIGQIKNFGLSDVKESLYFPQSTGEYIANIIATFWSMFSYSRNHRLM*

Click here to download the sequence:
Link to NCBI Protein BLAST