Transcript Information: S_Transcript_68640.p1


Annotated TAIR IDAT5G52110.1
Annotated Gene NameProtein of unknown function (DUF2930)
Annotated Gene Symbol(s)HCF208, CCB2
Annotation TypeOrtholog
Chromosome Positionchr5:21172653-21173953 | Reverse length=275
E-Value1.1E-96
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.8794462441954
Replicate 22.8302120715179
Replicate 33.0110589524246
Condition 2: 8 Hour
Replicate 13.4816963783074
Replicate 24.6961314928872
Replicate 34.7851902786693
Condition 3: 24 Hour
Replicate 12.4838205718168
Replicate 24.0305903969597
Replicate 33.6031492007309


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68640.p1 GENE.S_Transcript_68640~~S_Transcript_68640.p1 ORF type:5prime_partial len:343 (+),score=46.70,DUF2930|PF11152.4|2.4e-52 S_Transcript_68640:1-1029(+)
TTCACAACGTCAGCAAACATCATCATTTCACACATTGTCATAAGTACTCCACATAACTTTGAACGGAAGCGTTCAATTGGTAAAACTTTCATTCCGGTTTCCCCAAACAATAAAATGAACACACTTCCCTTAAATCAGTTATTGCCGTTAACCCTAGCATTCCCATTTCGCGCCAACTGTTCTCATCAATTTCATCATGCTACCCCTCTCAACACCAGAAGAATTCCAAGAAAACCTTTGCAATTTTATGCTCAAATTGATGAATCTTCAAAACCCACTAGCACTCAGGACCAAGTTAACCTCTCCGTTCTTCGCTTCACTTTTGGAATATCTTGGTTAGATGAATCTTACTTGCCCAGATGGATTGGGTACGGTTTCGGATTTCTCATTGTTTTGAACCATCTTGTGGGTTCAAGTTCTTCTGTGTCCTCAGCTCAGCTTGTATCAGAGGCTTTGGGTCTTTCGTTAGCAGCTTTCTCTGTCACCCTCCCATTTGTGGGAAGATTTCTTGAGGGAGCTACTGGAGAGGAGGTCACAAGTCTCCCTGAACAAGCACAACAAATTTTTGTGATGTCAAAAAATGTTGCAGATACAATGAGGGAGGACCTGGCTTGGGCGACTTATATTCTACTTCGAAATACGAAATCGATGTCAGTTCTCATATCTCTGCAAGATGTAATATGTGTGCGTGGCTATTGGAACACACCAGAAAGTTTATCAAAGGATGATATTCTTGACTGGTTTATAGGCCAAATCAAGAATTTTGGGCTGTCTGATGTGAAAGAGTCACTCTATTTTCCACAAAGCACAGGTTCAATCCTGGAGGAGGCTATTCCTGATGGAACTGGCTCTATTTTGATAGAGCCAGTGAACAGTTCAACTATGAGTACGGGAAAAGAGAATGTCTTAGGATTTGTCTTGCTAGCTTCAAGTATAAACTATGCCTACAGTGATAAAGACAGGCTGTGGATACAAGCCATTGCCAACAAATTTAGAGGTGAGACCCTCTTCATTGGCACTGCAGCATAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68640.p1 GENE.S_Transcript_68640~~S_Transcript_68640.p1 ORF type:5prime_partial len:343 (+),score=46.70,DUF2930|PF11152.4|2.4e-52 S_Transcript_68640:1-1029(+)
FTTSANIIISHIVISTPHNFERKRSIGKTFIPVSPNNKMNTLPLNQLLPLTLAFPFRANCSHQFHHATPLNTRRIPRKPLQFYAQIDESSKPTSTQDQVNLSVLRFTFGISWLDESYLPRWIGYGFGFLIVLNHLVGSSSSVSSAQLVSEALGLSLAAFSVTLPFVGRFLEGATGEEVTSLPEQAQQIFVMSKNVADTMREDLAWATYILLRNTKSMSVLISLQDVICVRGYWNTPESLSKDDILDWFIGQIKNFGLSDVKESLYFPQSTGSILEEAIPDGTGSILIEPVNSSTMSTGKENVLGFVLLASSINYAYSDKDRLWIQAIANKFRGETLFIGTAA*

Click here to download the sequence:
Link to NCBI Protein BLAST