Transcript Information: S_Transcript_68643.p1


Annotated TAIR IDAT5G52110.1
Annotated Gene NameProtein of unknown function (DUF2930)
Annotated Gene Symbol(s)HCF208, CCB2
Annotation TypeHomolog
Chromosome Positionchr5:21172653-21173953 | Reverse length=275
E-Value3E-56
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.1646938803735
Replicate 20.63338151839755
Replicate 31.5883696148555
Condition 2: 8 Hour
Replicate 12.7549547299645
Replicate 22.9971854636954
Replicate 32.2437734321033
Condition 3: 24 Hour
Replicate 10
Replicate 22.4941036662966
Replicate 31.0861167447179


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68643.p1 GENE.S_Transcript_68643~~S_Transcript_68643.p1 ORF type:5prime_partial len:209 (+),score=38.59,DUF2930|PF11152.4|4.9e-46 S_Transcript_68643:3-629(+)
ATTATTTTGAACCATCTTGTGGATTCAAGTTCTGTGTCCTCAGCTCAGTTTGTATCAGAAGCTTTGGGTTTTTCGTTAGCAGCTTTCTCTGTCACCCTCCCATTTGTGGGAAGATTTCTTGAGGGAGCTACTGGAGAGGAGGTCACAAGTCTCCCTGAACAAGCACAACAAATTTTTGTGATGTCAAAAAATGTTGCAGATACAATGAGGGAGGACCTGGCTTGGGCGACTTATATTCTACTTCGAAATACGAAATCGATGTCAGTTCTCATATCTCTGCAAGATGTAATATGTGTGCGTGGCTATTGGAACACACCAGAAAGTTTATCAAAGGATGATATTCTTGACTGGTTTATAGGCCAAATCAAGAATTTTGGGCTGTCTGATGTGAAAGAGTCACTCTATTTTCCACAAAGCACAGGTTCAATCCTGGAGGAGGCTATTCCTGATGGAACTGGCTCTATTTTGATAGAGCCAGTGAAGAGTTCAACTATGAGTATGGGAAAAGAGAATGTTTTAGGATTTGTCTTGCTAGCTTCAAGTATAAACTATGCCTACAGTGATAAAGACAGGCTGTGGATACAAGCCATTGCCAACAAATTTAGAGATCTGCCCAAGATTCGATAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68643.p1 GENE.S_Transcript_68643~~S_Transcript_68643.p1 ORF type:5prime_partial len:209 (+),score=38.59,DUF2930|PF11152.4|4.9e-46 S_Transcript_68643:3-629(+)
IILNHLVDSSSVSSAQFVSEALGFSLAAFSVTLPFVGRFLEGATGEEVTSLPEQAQQIFVMSKNVADTMREDLAWATYILLRNTKSMSVLISLQDVICVRGYWNTPESLSKDDILDWFIGQIKNFGLSDVKESLYFPQSTGSILEEAIPDGTGSILIEPVKSSTMSMGKENVLGFVLLASSINYAYSDKDRLWIQAIANKFRDLPKIR*

Click here to download the sequence:
Link to NCBI Protein BLAST