Transcript Information: S_Transcript_68660.p1


Annotated TAIR IDAT1G09760.1
Annotated Gene NameU2 small nuclear ribonucleoprotein A
Annotated Gene Symbol(s)U2A'
Annotation TypeOrtholog
Chromosome Positionchr1:3159476-3161603 | Reverse length=249
E-Value1.4E-107
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 117.298450802867
Replicate 216.462235285223
Replicate 313.548317661414
Condition 2: 8 Hour
Replicate 115.583939077905
Replicate 215.832385191191
Replicate 316.806725996235
Condition 3: 24 Hour
Replicate 111.678610789202
Replicate 213.598286945808
Replicate 314.454171601394


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68660.p1 GENE.S_Transcript_68660~~S_Transcript_68660.p1 ORF type:complete len:260 (+),score=54.64,LRR_9|PF14580.2|3.4e-47,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|4.1e-05,LRR_8|PF13855.2|0.0061,LRR_4|PF12799.3|6.5,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.0033,LRR_4|PF12799.3|0.056 S_Transcript_68660:501-1280(+)
ATGTTTCTTGATTTTTTTTATGAATACCCTGATATGCAGGATCAATTTGATACAATTGATTTGTCAGACAATGAGATCGTAAAACTTGAGAACTTCCCTTACTTAAACAGGCTGGGAACTTTGCTACTCAACAACAATAGAATCACCCGTATAAACCCAAACATCGGAGAGTTTTTGCCCAAACTGCATAGTCTGGTTCTAACAAACAATCGATTGGTTAACTTGGCTGAGATTGATCCGCTCGCATCCCTTCCAAAACTGCAATTTCTTAGTCTTCTGGACAACAATATTACTAAAAAGCCAAATTATCGCTTGTATGTCATTCACAAATTGAAATCGCTACGAGTACTAGACTTCAGGAAAGTTAAACAAAAGGAACGTGTTGAGGCAAATAATCTATTTGCATCCAAGGAGGCTGAAGATGAGGCCAAAAAAATAGCTGTGAAGACATTCACACCTGGTGAAGTACCTGTCGTTGAGGAGGCTCCAAAAGAAGAGAATGTACCTAAATCTACTGCTCCTACACCAGAGCAAATTATAGCTATCAAGGCTGCTATTGTCAATTCCCAAACACTCGAAGAAGTTGCTAGGCTTGAGAAGGCACTGAAGTCGGGCCAAATCCCAGCAGATCTGCAGATCCCTGATACTGAAGCCACTAATAACAGTGCAGATACCGAAGATGACAAGATGGTGACCGACAGTAAAAATGAAATGGATGCAAAAGAGGATGCTGAGCCTGTCAGCAAGGGTGATGAACCCGAAGCAATGGATGAAGCTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68660.p1 GENE.S_Transcript_68660~~S_Transcript_68660.p1 ORF type:complete len:260 (+),score=54.64,LRR_9|PF14580.2|3.4e-47,LRR_8|PF13855.2|1.2e-05,LRR_8|PF13855.2|4.1e-05,LRR_8|PF13855.2|0.0061,LRR_4|PF12799.3|6.5,LRR_4|PF12799.3|0.011,LRR_4|PF12799.3|0.0033,LRR_4|PF12799.3|0.056 S_Transcript_68660:501-1280(+)
MFLDFFYEYPDMQDQFDTIDLSDNEIVKLENFPYLNRLGTLLLNNNRITRINPNIGEFLPKLHSLVLTNNRLVNLAEIDPLASLPKLQFLSLLDNNITKKPNYRLYVIHKLKSLRVLDFRKVKQKERVEANNLFASKEAEDEAKKIAVKTFTPGEVPVVEEAPKEENVPKSTAPTPEQIIAIKAAIVNSQTLEEVARLEKALKSGQIPADLQIPDTEATNNSADTEDDKMVTDSKNEMDAKEDAEPVSKGDEPEAMDEA*

Click here to download the sequence:
Link to NCBI Protein BLAST