Transcript Information: S_Transcript_68831.p1


Annotated TAIR IDAT1G17630.1
Annotated Gene NamePentatricopeptide repeat (PPR-like) superfamily protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:6064525-6066720 | Forward length=731
E-Value1.1E-215
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.4983191043935
Replicate 21.2717157519747
Replicate 31.1619418175995
Condition 2: 8 Hour
Replicate 12.3726640701368
Replicate 22.5190821524625
Replicate 32.4001758697298
Condition 3: 24 Hour
Replicate 11.288438168346
Replicate 21.3975004457265
Replicate 31.7919146829372


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_68831.p1 GENE.S_Transcript_68831~~S_Transcript_68831.p1 ORF type:5prime_partial len:746 (+),score=155.17,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|0.0081,PPR_2|PF13041.2|8.5e-08,PPR_2|PF13041.2|2.5e-06,PPR_2|PF13041.2|0.0077,PPR_2|PF13041.2|0.87,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|8.7e-09,PPR_2|PF13041.2|0.026,PPR_2|PF13041.2|2.3,PPR|PF01535.16|61,PPR|PF01535.16|2.6,PPR|PF01535.16|0.033,PPR|PF01535.16|7e-05,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|0.00031,PPR|PF01535.16|4.6,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|32,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|0.002,PPR|PF01535.16|0.17,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|2.7e+03,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|1.2e+04,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|15,PPR_1|PF12854.3|9e-07,PPR_1|PF12854.3|3,PPR_1|PF12854.3|0.07,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|6.4e+03,DYW_deaminase|PF14432.2|4.5e+03,DYW_deaminase|PF14432.2|5.6e-33,PPR_3|PF13812.2|0.74,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|5.1,PPR_3|PF13812.2|8.6e+02,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|41,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|4.8e+02 S_Transcript_68831:1-2238(+)
CTCAATCATCTCGATCACCTTCTCCAAGAAAGCAACTCACTTGAGCAATCCAAACAAATCCACACCCAAATCATCATTACTGGTTCCTCTCAATCTGGGTTCCTTGCTTCTCGTCTTATTTCAAATTACAGCTGTTTTGGGCTTCTTGTTGATGCTCAGAAAGTGTTTGAAACAATTTCAGTTGATAGTTCAAGCTTGCTTTTGTGGAATTCAATTATAAGGGCTCACACAAATTATGCAAATTATGAAGAAAGTATTAATCTTTATGGCAGGTTAAAGAATCTTGGGGTTAAGCCAGATGGGTTTACTCTTCCTTTGGTTATAAGGGCATGTGCTGCAATTGGGGGTTATGAACTGTGTAGGATTGTTCGTAGTCATGTTTTGCAAATGGGTTTGCAGAATAATCTCCATGTTGTGAATGAATTGTTGAGGATGTTTGCCAAGTCGGGGCGTATGGACATTGCATATCAACTGTTTGATAGAATGCCTGTGAGAAGCTACATATCCTGGAATACCCTAATTTCTGGCCTTTCTATGAACTATGATTGTCAGGGTGCAGTGGAAATGTTTAGGAGGATGGAGTTTGAAGGATGGGAGCCTAACATTGTAACCTGGACATCATTGTTATCGAGCTACGCACGTTGTGGTTATTATGAAGAAACATTGAAATGGTTTGTTTTTATGAGAAGGAGAGGAATAGGGACCAATGCTGAGGCACTTGCTGTTGTTTTATCATCTAGTGCTGATCTTAAGGCAGTCAAAGAGGGTACTACAGTTCATGGGTATGTTGTAAAGGGTGGGTTTGAGGGTTTTCTAATTGTCAAGAACTCCCTCATATGCATGCATGGTAAAAATGGGGATTTGAAAGGTGCGAATGATTTGTTTTCAGAGATGGAAACAAGAAATTTGGTAACTTGGAATTCTTTGGTAACAGCTTATGCAGCGTGTGATGAGGCTTTTGAGATATTTTCTCAGCTGGAAAAATCAGATGATTCTGCAATGTTGAGACCAGATGTAGTAACCTGGAGTGCTGTAATTGGCGGGTTTGCTTCCAAGGGACGAGGGAGGGAGGCGCTTGATCTATTCAGAAAGATGCAGCTGGTGAAAGTGAAACCCAATCCGATTACAATTTCCTCTGTTCTATCTGCTTGTGCAGATCTGGCAGTGTTGCCTCTTGGCCAAGAAGTTCACGCCTATGTCATTAGATTATCTATGGATGGTAGTATCTTGGTTGGAAATGGCTTGATTAACATGTACACCAAGTGTGGATGTCTTAAACAAGGGGGTTTGGTATTTGAAAAATTGGATGCTCGTGATCTGGTGTCATGGAATTCGATGATTGCAGGATATGGAGTGCATGGATATGGCAAATTCGCATTGGGATTTTTTGCGAAAATGCTTAGAGATGGAATCAAACTAGATGAGGTCACCTTTGTTGCTCTTCTTTCTGCTTGCGCTCACAGTGGGCTTGTATCTGAGGGGCGTAAAATATTTGCTAAGATGAAGGATGAGTTTGATGTTGAATTATTGATGGAACATTATGCTTGTGTTGTTGATCTTCTTGCTCGAGCTGGGCGTGTGGAAGAAGCCAAAGAAATTATCAGCCACATGCCAATGGAACCCAATGAAGTTCTTTGGGGAGCTCTTCTGAATGCAAGCCGATTTAGTAAGAATCTGAAGATAGCAGAAGAAGCTGCTTCTCATATCGGCAGTTCTGATTCAGATGTAGCTGGCAGCTACATGCTACTATCAAATATCTATGCTGCAAGTGGGAGGTGGGATGAATCTGCAAAAGTGAGATTATCAGCAAGGATAAATGGTCTGAGGAAAACCCCTGGTTTAACATGGATACAGGTAAAGAAAAAAGTATATGAATTCTCTGCAGGAAATGCACCATTTGAGTTGGAGGAATTATACAAGATTCTTGAGGATTTGGGTTGTCGGATGGAAATTGAGGGTTATATACCAGATAAAAGTTTTGTTTTGCAAGATGTAGATGAAGACGAGAAAATTAGGTTACTGAATGGCCATAGTGAGAAGCTAGCTATTGCTTTTGGACACAGAAATATTCCCCTAAATATGCCCATCAGAATCATGAAGAACCTGCGAGTTTGTGGCGATTGCCATAACTGGACCAAGTATTTCTCCAAGGTAACAGGGAGAGAAGTCATTGTTAGAGATGGACGCCGATTCCATCACTTTCTTAATGGTTATTGTTCATGCAAAGATTATTGGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_68831.p1 GENE.S_Transcript_68831~~S_Transcript_68831.p1 ORF type:5prime_partial len:746 (+),score=155.17,PPR_2|PF13041.2|0.0011,PPR_2|PF13041.2|0.0081,PPR_2|PF13041.2|8.5e-08,PPR_2|PF13041.2|2.5e-06,PPR_2|PF13041.2|0.0077,PPR_2|PF13041.2|0.87,PPR_2|PF13041.2|3.6e-12,PPR_2|PF13041.2|1.3e+04,PPR_2|PF13041.2|8.7e-09,PPR_2|PF13041.2|0.026,PPR_2|PF13041.2|2.3,PPR|PF01535.16|61,PPR|PF01535.16|2.6,PPR|PF01535.16|0.033,PPR|PF01535.16|7e-05,PPR|PF01535.16|1.1e-06,PPR|PF01535.16|0.00031,PPR|PF01535.16|4.6,PPR|PF01535.16|4.5e-06,PPR|PF01535.16|32,PPR|PF01535.16|1.6e-06,PPR|PF01535.16|0.002,PPR|PF01535.16|0.17,PPR|PF01535.16|3.3e+02,PPR|PF01535.16|2.7e+03,PPR_1|PF12854.3|1.2e+03,PPR_1|PF12854.3|1.2e+04,PPR_1|PF12854.3|0.03,PPR_1|PF12854.3|0.15,PPR_1|PF12854.3|0.0022,PPR_1|PF12854.3|0.1,PPR_1|PF12854.3|15,PPR_1|PF12854.3|9e-07,PPR_1|PF12854.3|3,PPR_1|PF12854.3|0.07,PPR_1|PF12854.3|0.21,PPR_1|PF12854.3|3e+03,PPR_1|PF12854.3|6.4e+03,DYW_deaminase|PF14432.2|4.5e+03,DYW_deaminase|PF14432.2|5.6e-33,PPR_3|PF13812.2|0.74,PPR_3|PF13812.2|1.5e+04,PPR_3|PF13812.2|5.1,PPR_3|PF13812.2|8.6e+02,PPR_3|PF13812.2|0.17,PPR_3|PF13812.2|0.051,PPR_3|PF13812.2|41,PPR_3|PF13812.2|0.22,PPR_3|PF13812.2|1.8e+03,PPR_3|PF13812.2|0.12,PPR_3|PF13812.2|0.0027,PPR_3|PF13812.2|4.8e+02 S_Transcript_68831:1-2238(+)
LNHLDHLLQESNSLEQSKQIHTQIIITGSSQSGFLASRLISNYSCFGLLVDAQKVFETISVDSSSLLLWNSIIRAHTNYANYEESINLYGRLKNLGVKPDGFTLPLVIRACAAIGGYELCRIVRSHVLQMGLQNNLHVVNELLRMFAKSGRMDIAYQLFDRMPVRSYISWNTLISGLSMNYDCQGAVEMFRRMEFEGWEPNIVTWTSLLSSYARCGYYEETLKWFVFMRRRGIGTNAEALAVVLSSSADLKAVKEGTTVHGYVVKGGFEGFLIVKNSLICMHGKNGDLKGANDLFSEMETRNLVTWNSLVTAYAACDEAFEIFSQLEKSDDSAMLRPDVVTWSAVIGGFASKGRGREALDLFRKMQLVKVKPNPITISSVLSACADLAVLPLGQEVHAYVIRLSMDGSILVGNGLINMYTKCGCLKQGGLVFEKLDARDLVSWNSMIAGYGVHGYGKFALGFFAKMLRDGIKLDEVTFVALLSACAHSGLVSEGRKIFAKMKDEFDVELLMEHYACVVDLLARAGRVEEAKEIISHMPMEPNEVLWGALLNASRFSKNLKIAEEAASHIGSSDSDVAGSYMLLSNIYAASGRWDESAKVRLSARINGLRKTPGLTWIQVKKKVYEFSAGNAPFELEELYKILEDLGCRMEIEGYIPDKSFVLQDVDEDEKIRLLNGHSEKLAIAFGHRNIPLNMPIRIMKNLRVCGDCHNWTKYFSKVTGREVIVRDGRRFHHFLNGYCSCKDYW*

Click here to download the sequence:
Link to NCBI Protein BLAST