Transcript Information: S_Transcript_69154.p1


Annotated TAIR IDAT5G60370.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24282858-24284760 | Forward length=413
E-Value4E-27
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 13.3266251543976
Replicate 20.39397838495562
Replicate 31.8113401510679
Condition 2: 8 Hour
Replicate 13.2368896017077
Replicate 22.7964810799658
Replicate 35.519281969147
Condition 3: 24 Hour
Replicate 11.9504360259459
Replicate 21.4164882235217
Replicate 31.1259841252284


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69154.p1 GENE.S_Transcript_69154~~S_Transcript_69154.p1 ORF type:5prime_partial len:112 (+),score=23.13,Exo5|PF09810.5|2.5e-17 S_Transcript_69154:1-336(+)
GTAAAGAAGAGTACAGCTGACTCCGGTTTAGCTGCTGAGACCCTTGGTGAAGTCGTGAGGTATTTCAGCAATGCTTGTTCCACACTGCCTCCTGCTCATGATCAACTTCTCTTAAGATATGAACTCCAAGAGGATTACTCGTTGATCGGTGAGGATGAATTCACATACGATGGTGACTGGCTTCGGGCGCAAATTCACAGCTGCCTTGAGTTCTGGCAGGGAGAGCGAGATGCCAAGTATGTTCAACAGGAGGAGCGTTGGAAATGCCGGTATTGCCAGTTTGCCTCTGTCTGTCCTTCCCAAAATGATAGTACTAATTCTCAAACAAGCTCATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69154.p1 GENE.S_Transcript_69154~~S_Transcript_69154.p1 ORF type:5prime_partial len:112 (+),score=23.13,Exo5|PF09810.5|2.5e-17 S_Transcript_69154:1-336(+)
VKKSTADSGLAAETLGEVVRYFSNACSTLPPAHDQLLLRYELQEDYSLIGEDEFTYDGDWLRAQIHSCLEFWQGERDAKYVQQEERWKCRYCQFASVCPSQNDSTNSQTSS*

Click here to download the sequence:
Link to NCBI Protein BLAST