Transcript Information: S_Transcript_69160.p3


Annotated TAIR IDAT5G60370.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr5:24282858-24284760 | Forward length=413
E-Value1E-23
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.043647107262
Replicate 20.43260371681402
Replicate 31.2656779665216
Condition 2: 8 Hour
Replicate 10
Replicate 20.43866369881817
Replicate 31.2538733885283
Condition 3: 24 Hour
Replicate 10.42833104883518
Replicate 20.66658269342198
Replicate 30.98909978059279


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69160.p3 GENE.S_Transcript_69160~~S_Transcript_69160.p3 ORF type:3prime_partial len:102 (+),score=25.90 S_Transcript_69160:1060-1362(+)
ATGTTCTTTGGTGCTGAGAGCAGGCTGCAATTGATGTGCTACAAGTTGCTGTGGGACAAATTAGTCTCTGATAACTTTCCTTCTGAACAATTTTTTGATTTCTTTTCCTTGGATCCACAACACATTTTATCAGATGAGGTAAAGAAGAGTACAGCTGACTCCGGTTTAGCTGCTGAGACCCTTGGTGAAGTCGTGAGGTATTTCAGCAATGCTTGTTCCACACTGCCTCCTGCTCATGATCAACTTCTCTTAAGATATGAACTCCAAGAGGATTACTCGTTGATCGGTGAGGATGAATTCACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69160.p3 GENE.S_Transcript_69160~~S_Transcript_69160.p3 ORF type:3prime_partial len:102 (+),score=25.90 S_Transcript_69160:1060-1362(+)
MFFGAESRLQLMCYKLLWDKLVSDNFPSEQFFDFFSLDPQHILSDEVKKSTADSGLAAETLGEVVRYFSNACSTLPPAHDQLLLRYELQEDYSLIGEDEFT

Click here to download the sequence:
Link to NCBI Protein BLAST