Transcript Information: S_Transcript_69162.p1


Annotated TAIR IDAT5G60370.1
Annotated Gene NameFUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; CONTAINS InterPro DOMAIN/s: Defects-in-morphology protein 1-like, mitochondrial (InterPro:IPR019190); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G57110.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:24282858-24284760 | Forward length=413
E-Value5.4E-89
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 17.6865889126134
Replicate 25.951542687177
Replicate 35.3267848088874
Condition 2: 8 Hour
Replicate 19.9363535265116
Replicate 210.24106422745
Replicate 310.628883138179
Condition 3: 24 Hour
Replicate 15.0594416803829
Replicate 26.6077052824773
Replicate 35.7041680807211


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69162.p1 GENE.S_Transcript_69162~~S_Transcript_69162.p1 ORF type:3prime_partial len:367 (+),score=65.87,Exo5|PF09810.5|1.1e-29,Exo5|PF09810.5|3.4e-09 S_Transcript_69162:154-1251(+)
ATGCCTGATTCTCCAACTCACACTCTCACCACCCACGATCTCCTCCACCTTCACCCTCACCCTCACCCCAACGAAACCAACAACAACCAACGATCAGAAAACCTCCATGAAAACACACATGAACCTCACAATCAAATCCCAACTGAAATTGAAATTATAAGCGAAGAAGAAATGGCACTCATTGAAGCCGCGTTCTTGTTAGCACGCTCTTCTTCTTCTTCTTCTGCTCTTCCTTTATCTCCTCGTTTATCTCTTTCGAACTCTATTGCCCATTTCTCAAAACGGGCATTGCCCGCTTTATCCGGGTCATCGGGTTCGGTTTGTGATGTTGAGGATTCGGGTCAGTTGAGGAAACCCAACAAGAAATGTAAAGTGCCCCAGTCGCCTTTGAGTCGGTTTCGGAGGAAAAAAGGGCTCTTTGTCACTGACATCACTGCCACTGAATGGTGTGAAAAACAAATGGAGTTCGTTCTCCAATTCGGAAAGCCAGAACTCACAAACGCAATGAAAGCAGGGATTTCTCGGCATGCGAAGCTAGAGGAAGAGGTAATAAAAAAAGTGGAAGTACGTGTAGAATCACTTGCAGATATATGGGCTTTGAAGTTCATGAACTTTATTGTTTGTGCAAACCAGCTGTTGTTTGAGGGATTAACCCGTGAAGTGCCCGTAGTTGGCCACATTCAAGGAGTATGGATGGTTGGAGTGATTGATGAACTCCGGATGCCTGTAACAGGGAACAATAGGATTTTGACACTCATTGATACAAAGACTCGTAAGCAACCAAGGCTTCCTGCTGAACCACAAAGCAGAAATGGAAGGCTGCAATTGATGTGCTACAAGTTGCTGTGGGACAAATTAGTCTCTGATAACTTTCCTTCTGAACAATTTTTTGATTTCTTTTCCTTGGATCCACAACACATTTTATCAGATGAGGTAAAGAAGAGTACAGCTGACTCCGGTTTAGCTGCTGAGACCCTTGGTGAAGTCGTGAGGTATTTCAGCAATGCTTGTTCCACACTGCCTCCTGCTCATGATCAACTTCTCTTAAGATATGAACTCCAAGAGGATTACTCGTTGATCGGTGAGGATGAATTCACA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69162.p1 GENE.S_Transcript_69162~~S_Transcript_69162.p1 ORF type:3prime_partial len:367 (+),score=65.87,Exo5|PF09810.5|1.1e-29,Exo5|PF09810.5|3.4e-09 S_Transcript_69162:154-1251(+)
MPDSPTHTLTTHDLLHLHPHPHPNETNNNQRSENLHENTHEPHNQIPTEIEIISEEEMALIEAAFLLARSSSSSSALPLSPRLSLSNSIAHFSKRALPALSGSSGSVCDVEDSGQLRKPNKKCKVPQSPLSRFRRKKGLFVTDITATEWCEKQMEFVLQFGKPELTNAMKAGISRHAKLEEEVIKKVEVRVESLADIWALKFMNFIVCANQLLFEGLTREVPVVGHIQGVWMVGVIDELRMPVTGNNRILTLIDTKTRKQPRLPAEPQSRNGRLQLMCYKLLWDKLVSDNFPSEQFFDFFSLDPQHILSDEVKKSTADSGLAAETLGEVVRYFSNACSTLPPAHDQLLLRYELQEDYSLIGEDEFT

Click here to download the sequence:
Link to NCBI Protein BLAST