Transcript Information: S_Transcript_69180.p1


Annotated TAIR IDAT1G20410.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr1:7079049-7082504 | Reverse length=504
E-Value4E-178
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 110.30820159575
Replicate 210.230232029462
Replicate 312.363845419174
Condition 2: 8 Hour
Replicate 111.476792926725
Replicate 29.2486972030155
Replicate 39.2884699060813
Condition 3: 24 Hour
Replicate 111.430935308858
Replicate 29.4960104370171
Replicate 38.9709692390636


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69180.p1 GENE.S_Transcript_69180~~S_Transcript_69180.p1 ORF type:complete len:537 (+),score=102.38 S_Transcript_69180:178-1788(+)
ATGGCCGGAAAAGACGCCGAAGTTGCCTCACTTTCCGGCGACGTGGAGAAAAATATATCCAGCAACTCCGACGAAGAGATTCGCCTCCTTGACGACGTCGTTCGCTCGTTTCCACCTCAAGCTGTCCACCTCTTGCTCTCCCTCGGGGTTTGTCCTCAGTGTATTCTTCGGCTATTTGGAAAACATGGAGTGAGTTACTCCAGCTCGTCTTGCGTTTTGAGTTTATTAACAGCTGTCGTTGGTCAGGAGCTCAGCACTGATGAACTTTCATCTAAAGGTTCAGATGATGAGAATAGTGTTTGCAAAGTTTGTTATGGTATTCTGCAGTTTATTTATGTTGATGAGAAACAAGGTTTAGTAAAGAAAAATTGTGCCAATGATTTGGCTGTATCTATATGTGAACTATCGAGACGAGAAGGGCATCAAGTTGATGGCTTTTCTCTTGAAGTCTCCATTCCGCAATTTGTTTTAGACAAGGAGAATGATGTCAGGTTATTGATGAAAGTGAAGTATGGTTTTGAAGCTTGGTTCCGTGAAATACTTGAGTGTGAAATCATTTCAGTCAAGGATGCTTTGAAGCTATCTATTACTCAACCCTTAGAGAGACTATTTGGTGTGAAATCTAGTTCAAGCTCATTTCGTGTTCGGTTGACTTACTCCTCTTCTCAGCTTCAAGTGAAGAGTGAAAATGGCAAGGACAGCAATCAAGCTTCCAAGAGAAGGAAAACAGGGAATGGCAATGATGTTCTTGAACTTGGAAAAGAACCGACTCTGAGGAAATGTTCAAGCAGTTCACCAGATACAAAAGTTTCCAACTCCTACAAACCTTTAGTTGGGAAGGTGTCAGCCTGCTCCCTGGCAATTGTTTGTTACAGGATGCCTATCTATATCGGTGGTAGATACTTGAAGTACTCAAGAAACGTAAGTCAAACACGTTGGATCATTGATGATGAGAGAATGGGGGAAGCATCTGTTGAGGAAATTGTGGCCGGTGGCATTCTTCCACTTTGCAGAGGTGATAATTACAAGTTCCATGCTGCCGGTAGAGAAGATATAGATGTTCGGATGTTGGGCTTAGGACGACCTTTCCTACTAGAAATACAAAATTCTCGTGTTGTGCCATCAGAATTGTCTGTAAAGGAGATGGAAGCGAAAATCAATGGCTTGGACGGCAGATTGGTAAAGGTGAAAAACCTTAAGGTCGTTGATGATCAAGGTTGGAACCTTATGCGTGAAGGTGAAGCAGAGAAGCAGAAGCAATATGCTGCCCTAGTATGGATTTCACGTCCACTCCAGGATAAAGACTTTGAAACCATATCCTCGTTGAAGGAGATGAAGGTCTTGCAGAGAACTCCAGTCAGGGTGCTTCATCGTCGAAGTCCTCTAGAACGTGAAAAGATAATCCATTGGATGAACATTGAGAGAATTGCTGGAAGCACTCAATATTTTCTCTTGCATCTTTGTACTCAGGCTGGAACCTACATCAAGGAATTTGTTCATGGGGATCTTGGACGCACTTATCCAAGCATTGGTTCAATTCTAGGCTGCAGGGCTGAGATTCTCCAACTGGATGTAACAGATGTGAAGATGGACTGTTTCATGAGTAAATGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69180.p1 GENE.S_Transcript_69180~~S_Transcript_69180.p1 ORF type:complete len:537 (+),score=102.38 S_Transcript_69180:178-1788(+)
MAGKDAEVASLSGDVEKNISSNSDEEIRLLDDVVRSFPPQAVHLLLSLGVCPQCILRLFGKHGVSYSSSSCVLSLLTAVVGQELSTDELSSKGSDDENSVCKVCYGILQFIYVDEKQGLVKKNCANDLAVSICELSRREGHQVDGFSLEVSIPQFVLDKENDVRLLMKVKYGFEAWFREILECEIISVKDALKLSITQPLERLFGVKSSSSSFRVRLTYSSSQLQVKSENGKDSNQASKRRKTGNGNDVLELGKEPTLRKCSSSSPDTKVSNSYKPLVGKVSACSLAIVCYRMPIYIGGRYLKYSRNVSQTRWIIDDERMGEASVEEIVAGGILPLCRGDNYKFHAAGREDIDVRMLGLGRPFLLEIQNSRVVPSELSVKEMEAKINGLDGRLVKVKNLKVVDDQGWNLMREGEAEKQKQYAALVWISRPLQDKDFETISSLKEMKVLQRTPVRVLHRRSPLEREKIIHWMNIERIAGSTQYFLLHLCTQAGTYIKEFVHGDLGRTYPSIGSILGCRAEILQLDVTDVKMDCFMSK*

Click here to download the sequence:
Link to NCBI Protein BLAST