Transcript Information: S_Transcript_69361.p1


Annotated TAIR IDAT5G63920.1
Annotated Gene Nametopoisomerase 3alpha
Annotated Gene Symbol(s)TOP3A, AtTOP3alpha
Annotation TypeHomolog
Chromosome Positionchr5:25574533-25581230 | Forward length=926
E-Value3E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 125.461185691972
Replicate 231.109035845334
Replicate 329.239508688351
Condition 2: 8 Hour
Replicate 124.580062643438
Replicate 226.244879383734
Replicate 322.189845912247
Condition 3: 24 Hour
Replicate 140.75389425694
Replicate 242.797949423216
Replicate 338.263967138513


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69361.p1 GENE.S_Transcript_69361~~S_Transcript_69361.p1 ORF type:complete len:439 (+),score=70.63,zf-C4_Topoisom|PF01396.15|3.2e-09,zf-C4_Topoisom|PF01396.15|1.2,zf-GRF|PF06839.8|3.6e-09,zf-GRF|PF06839.8|2.6e+03 S_Transcript_69361:369-1685(+)
ATGGGATATGATGATATGGGATATGAGCTCTGGAAACCTTATTTGAGATCCAAGATGGAGGATGATATGAAGGCTGTTAGCTTTGGTACAAAGAGGAAAACTGAAGTTCTGGCTTCTGGTTTGCAGGAGATGAAGACTTGTTTCTTGGATGCTAAGCAGAGCAAAGCTAAACTCTTTGAAGCAATGGAGATTTTCTTTGATAGAACTAATAGAACTGGTATGGAGGAGCAGAATGCTGTATTTGGTGTTGTTCGGCGCTGTGGTCTTTGTCAGCAAGCTGATATGGTGCTGAAACGTAAACCGGATGGAAACTTCATGGTTGGATGCTCGGGTTTTCCTCAGTGTAGAAATGTTGTTTGGCTTCCTGGATCTATATCAGAGGCAGTTGTAACCTCAAATATATGCAACTCTTGCGTGCCAGGTCCAGTTTTCTTGATTCAGTTCAAATTCCGTCGGTCAGAAATACCTCCAAATTACAATGTGGACCACTTAGGCTGCATTGGTGGATGTGATGGAACACTCAGACAGCTTACAGAGATATGTGGAACTGGTTCTCGTAATCCTTCTGGGATGCCAGGTCCAGGGAGAGGTCGGCAACCTACTGCATCTTCTGGACACATTCCTGCTAGTTATGCACGAAACGAAATCTGTGCCCACTGCAGAGGAACAGGACATAACTCGAATGATTGCCCTTCACAGGTTTCAACTTCTGGACGTGCTAGGTCTCAAAGAACAAATAATCAGAATGGCCAATCATCAGTGACTTGTAGTTCATGTGCAGAACCCTGCATATTGCGGACAGCAAATACAGCTAACAATAGGGGAAGAAAGTTCTACTCATGCCAATCTCAGGAGTGCAGATTCTTTGTGTGGGAGGATATGATTGGCAATGGAGGTGGAGTATCGAATTCTCCACATGCTAATGGTAGAGCCTCAACTGCTAATTCAAGTAGGCGAGGTGGCAGGGGCAGGGGTCGCCGTGGTGGGGGACGGGGAAATGATGTGACCTTTGTTTCAGCAACTGGTGATCCTGTATCCGGCAGAAGATGCTTTACTTGTGGAGATCCATCTCACTTTGCCAGCGCCTGCCCTAAGTACGTAGATCCTCTGTCCATTTTATTAGCGACTGTCCTCAAACCAACTTCTGAGCAATGCAGTTTTAAATCATTTATTCTGTACATCTTAATTGTATGTATCAATTGTAACCCTTATTCGAGCATGTTTGGCCTAATTTCTCCTAAAAACTATTTCTCCCTCTTACATTCCTTATCTCCTCCCTCCTCATCCTTCACATTCTCTATCATTTTTAAGTTCTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69361.p1 GENE.S_Transcript_69361~~S_Transcript_69361.p1 ORF type:complete len:439 (+),score=70.63,zf-C4_Topoisom|PF01396.15|3.2e-09,zf-C4_Topoisom|PF01396.15|1.2,zf-GRF|PF06839.8|3.6e-09,zf-GRF|PF06839.8|2.6e+03 S_Transcript_69361:369-1685(+)
MGYDDMGYELWKPYLRSKMEDDMKAVSFGTKRKTEVLASGLQEMKTCFLDAKQSKAKLFEAMEIFFDRTNRTGMEEQNAVFGVVRRCGLCQQADMVLKRKPDGNFMVGCSGFPQCRNVVWLPGSISEAVVTSNICNSCVPGPVFLIQFKFRRSEIPPNYNVDHLGCIGGCDGTLRQLTEICGTGSRNPSGMPGPGRGRQPTASSGHIPASYARNEICAHCRGTGHNSNDCPSQVSTSGRARSQRTNNQNGQSSVTCSSCAEPCILRTANTANNRGRKFYSCQSQECRFFVWEDMIGNGGGVSNSPHANGRASTANSSRRGGRGRGRRGGGRGNDVTFVSATGDPVSGRRCFTCGDPSHFASACPKYVDPLSILLATVLKPTSEQCSFKSFILYILIVCINCNPYSSMFGLISPKNYFSLLHSLSPPSSSFTFSIIFKF*

Click here to download the sequence:
Link to NCBI Protein BLAST