Transcript Information: S_Transcript_69391.p1


Annotated TAIR IDAT5G53130.1
Annotated Gene Namecyclic nucleotide gated channel 1
Annotated Gene Symbol(s)CNGC1, ATCNGC1
Annotation TypeOrtholog
Chromosome Positionchr5:21537830-21540490 | Reverse length=716
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 112.394586589252
Replicate 210.86168101293
Replicate 311.091435686641
Condition 2: 8 Hour
Replicate 117.925258154681
Replicate 215.675938697207
Replicate 315.830370738804
Condition 3: 24 Hour
Replicate 112.007047848676
Replicate 29.9847561490202
Replicate 311.464565638689


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69391.p1 GENE.S_Transcript_69391~~S_Transcript_69391.p1 ORF type:5prime_partial len:715 (+),score=113.16,Ion_trans|PF00520.27|3.9e-36,cNMP_binding|PF00027.25|1.8e-07 S_Transcript_69391:3-2147(+)
TTTTGTTACAACATACGAGCCAAAGTAATGAAGTATAACCAGGAGAAGGTTGTCAGGTTTCAGGAATGGGTTCCTCAGAAAAGTGCGGATGGGCACTTTTTTGTGAAAGATGATATTCACCCTGGCATATTCAGAAGGTTGTTTGACTTGATTTTGGATAGATTCAAAAGAGGCTTGGACTACTTTCCTGAGGGTTTTAGAAGGACTGGGAAATGTTTAAGTGGGAGCTCTTTGCATGCCTCGTGGTTTAAGAAGAAAGTTTTAGATCCGCAAGGCACATTTCTTCAGAAGTGGAATAAGATATTTGTTTTATCATGCGTTATTGCAGTGTCAATAGATCCTTTGTTCTTTTACATCCCTGTAATTAACAATGATAAGAAGTGCCTTGATTTGGACAATAAGTTGGAGATCACAGCTAGTGTTTTGCGCTCTTTCACTGATATCTTTTATGTCCTTCATATCATCTTCCAGTTTCGTACTGGTTTTATTGCTCCCTCTTCCCGGGTCTTTGGCAGAGGTGTTCTGGTCGAAGATGCAAAAGAAATTGCAAAAAGATATTTGTCCTCTTACTTCTGGATTGACATTCTTGCTGTACTTCCTTTACCACAGGTGGCGATCTTAATTATCATACCTAAATTGAGAGGCTCGAGGTCATTGAACACAAAGAACTTGCTGAAGTTTGTTGTGTTCTTCCAGTACATTCCCAGGATTCTTAGAGTGTTTCCATTATATAAAGAAGTTACAAGAACCTCTGGCATCTTGACTGAAACAGCTTGGGCTGGAGCTGCCTTCAATCTCTTTCTGTACATGCTTGCAAGTCATGTAGCAGGAGCATTTTGGTACCTGTTTTCTATAGAACGCGAAACAACATGCTGGAGGAAGGCCTGTGGAAAGCACCCTGGGTGTGATTATGCTACTTTATATTGTGACATGAGTTCTGGAAATAACACCTATGTGGATCAGTCATGCCCTCTCATATCTGATGGTCCCTTCGATTTTGGAATTTTTCTTCATGCCCTAAAGTCTGGTGTAGTGGAGACGAGAGATTTCCCAAAGAAGCTCTTCTTCTGTTTCTGGTGGGGCCTGCAAAATTTGAGTGCCCTTGGTCAAGACCTTGAAACAAGTACCTATATCTGGGAAATCTGTTTTGCTATATTGATAGCCATTGCTGGCTTGGTGTTGTTTGCGTTTCTTATCGGAAATATGCAGACCTATTTGCAATCAATAACAACGAGATTAGAGGAGATGAGAGTTAAAAAACGAGATTCAGAACAATGGATGTCCCACCGCCTTCTCCCTGAGAATCTGAGAGAGAGGATCAGGCGGTATGAACAATACAAGTGGCAAGAAACAAGAGGGGTTGATGAAGAGAACTTGCTCCAAAACCTTCCCAAGGACCTTAGGAGGGATATAAAGCGTCATCTTTGTTTGGGGCTGCTTACAAGGGTCCCTATGTTTGAGAAAATGGACGACCAGCTTTTGGATGCAATGTGTGATCGTCTGAAGCCAGTACTGTACACGGAGGACAGCTACATTATCCGGGAAGGGGACCCAGTTGATGCGATGGTTTTCGTCATGCGTGGCAAGCTTCTGACAATGACGACAAATGGTGGGAGGACGGGTTTCTTCAACTCCGATTATTTGAAAGCTGGTGATTTTTGTGGTGAGGAACTCCTTACGTGGGCCCTTGATCCCCACTCTTCATCCAACCTTCCTCTATCAACCAGAACGGTTCAAACTCTAACAGAAGTCGAAGCTTTTTCCCTAATGGCTGATGATTTGAAGTTTGTTGCTTCTCAATTCCGAAGACTCCATAGCAAACAGCTCCGTCACACCTTCAGGTTTTACTCCCAGCAGTGGAGGACTTGGGCGGCTTGCTTTATACAGGCAGCTTGGAGGCGGTACCTCAGGAAGAAGATGGAGCTGTCACTCAAGGAAGAGGAGGATAGATTACAGGATGCATTGGCTAGAGAAGGCGGGAGCTCTCCTAGTTTAGGTGCAACTCTATATGCATCGAGGTTTGCAGCTAATGCACTTCGTAATTTAAGGAAGAACGTGGCTCGGCAGGCAAGGTTGCCGGAGAGAATACCTCCTATGCTGCTTCAGAAGCCCGCAGAGCCAGATTTCTCAGTAGATGATCAGTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69391.p1 GENE.S_Transcript_69391~~S_Transcript_69391.p1 ORF type:5prime_partial len:715 (+),score=113.16,Ion_trans|PF00520.27|3.9e-36,cNMP_binding|PF00027.25|1.8e-07 S_Transcript_69391:3-2147(+)
FCYNIRAKVMKYNQEKVVRFQEWVPQKSADGHFFVKDDIHPGIFRRLFDLILDRFKRGLDYFPEGFRRTGKCLSGSSLHASWFKKKVLDPQGTFLQKWNKIFVLSCVIAVSIDPLFFYIPVINNDKKCLDLDNKLEITASVLRSFTDIFYVLHIIFQFRTGFIAPSSRVFGRGVLVEDAKEIAKRYLSSYFWIDILAVLPLPQVAILIIIPKLRGSRSLNTKNLLKFVVFFQYIPRILRVFPLYKEVTRTSGILTETAWAGAAFNLFLYMLASHVAGAFWYLFSIERETTCWRKACGKHPGCDYATLYCDMSSGNNTYVDQSCPLISDGPFDFGIFLHALKSGVVETRDFPKKLFFCFWWGLQNLSALGQDLETSTYIWEICFAILIAIAGLVLFAFLIGNMQTYLQSITTRLEEMRVKKRDSEQWMSHRLLPENLRERIRRYEQYKWQETRGVDEENLLQNLPKDLRRDIKRHLCLGLLTRVPMFEKMDDQLLDAMCDRLKPVLYTEDSYIIREGDPVDAMVFVMRGKLLTMTTNGGRTGFFNSDYLKAGDFCGEELLTWALDPHSSSNLPLSTRTVQTLTEVEAFSLMADDLKFVASQFRRLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYLRKKMELSLKEEEDRLQDALAREGGSSPSLGATLYASRFAANALRNLRKNVARQARLPERIPPMLLQKPAEPDFSVDDQ*

Click here to download the sequence:
Link to NCBI Protein BLAST