Transcript Information: S_Transcript_69420.p1


Annotated TAIR IDAT3G21000.1
Annotated Gene NameGag-Pol-related retrotransposon family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr3:7363921-7365138 | Forward length=405
E-Value9E-11
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 10.60029326094392
Replicate 20.60824733115956
Replicate 31.0631151125885
Condition 2: 8 Hour
Replicate 11.1758360575863
Replicate 20.84104694134311
Replicate 31.4958489547355
Condition 3: 24 Hour
Replicate 10.65698897716073
Replicate 20.73841992604641
Replicate 30.56891829485224


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69420.p1 GENE.S_Transcript_69420~~S_Transcript_69420.p1 ORF type:3prime_partial len:399 (+),score=53.94,UBN2_2|PF14227.2|3.8e-39,UBN2|PF14223.2|9.9e-21,UBN2_3|PF14244.2|4.9e-06,UBN2_3|PF14244.2|9.9e+03 S_Transcript_69420:161-1354(+)
ATGTCGACCAAATTTGACATTGAGAAATTTGACGGTAAAATTAGTTTTGCTATCTGGCGGGTCCAGATGCTAGCCGTTCTTACTCAACATGGGTTAAGGAAGGCTCTGTCAGGTAAACTAAAAAGGCCAGCCACTATGACGGATGAGCAGTGGGATGAGCTGGATGAAAAGGCGTTGTCCACTATTCAGCTATGTTTGTCCCGTGAGGTGTTACGTGAGGTCATCAATGCAACAACTGCTGCTGACATATGGTCAAAATTGGAGTCTCTTTATATGACGAAAAGTCTGGCAAATAAACTCCGTTTAAAGGAGCGACTCTTTACACTCCGTATGTCAGAAGGTACTCCCATTCATTCTCACCTTGATGAATTTAATTCCATTATTATTGATTTGGAAAATCTGGAGGTCAAAATTGATGATGAGGATAAAGCCGTACTACTTATTGTTTCACTTCCACCCTCATATCGACATTTCAAAGAAATTATGTTATATGGTAATTATATTACCTTAACCTTTGATGATGTCAAGTCAAACTTACTGTCCAAAGAAAAATTTGATACCGAAATTCATTCTGAAAATTCGGGTGAAGGACTAGTAGTAAGAGGGAGAAGCCAAGAAAGAGGTAGTAATGGGAAAAATAAATCCAGGTCAAAATCTAGAGGTAAAAACTCTAAATATTGTCGTTATTGCAAGAAAAAAGGACACGAAATCTCTGATTGTTTTAAGCTGAAAAATAAGCAAGACAGAGAAGATAAGGGTAAAGGCAAACAAGCCGAAAAATCTGCCGAAGCTAGTATTGTTGAGTCCGAATCCGATGGGGATTGTTTTGTAGCTGCTGACACTGAACAAAGGTCCAAAAATGAATGGATTCTTGATTCTGGTTGTACCTATCACATGTCTCCTAATAGAGACTGGTTTACCACCTATGAACCGGTTAATGGTGGTCTTGTCTTGATGGGCAATGATACTCAATGTAAAGTTGTCGGTCGAGGTACAATTAAAATCAAGACACATGATGGTGTTGTAAGGACATTGACAGGTGTCAGACATGTCCCCGATTTGAAACGGAATCTCATTTCTTTAGGCACCCTTGAATCTCATGGGTGTAAATACTCAGCTGAAGGTGGAGTTCTGAAAGTGTCCAAAGGTGCTCTTGTGTTACTAAAGGCAACTCGATCTGGTAGTCTCTATGTG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69420.p1 GENE.S_Transcript_69420~~S_Transcript_69420.p1 ORF type:3prime_partial len:399 (+),score=53.94,UBN2_2|PF14227.2|3.8e-39,UBN2|PF14223.2|9.9e-21,UBN2_3|PF14244.2|4.9e-06,UBN2_3|PF14244.2|9.9e+03 S_Transcript_69420:161-1354(+)
MSTKFDIEKFDGKISFAIWRVQMLAVLTQHGLRKALSGKLKRPATMTDEQWDELDEKALSTIQLCLSREVLREVINATTAADIWSKLESLYMTKSLANKLRLKERLFTLRMSEGTPIHSHLDEFNSIIIDLENLEVKIDDEDKAVLLIVSLPPSYRHFKEIMLYGNYITLTFDDVKSNLLSKEKFDTEIHSENSGEGLVVRGRSQERGSNGKNKSRSKSRGKNSKYCRYCKKKGHEISDCFKLKNKQDREDKGKGKQAEKSAEASIVESESDGDCFVAADTEQRSKNEWILDSGCTYHMSPNRDWFTTYEPVNGGLVLMGNDTQCKVVGRGTIKIKTHDGVVRTLTGVRHVPDLKRNLISLGTLESHGCKYSAEGGVLKVSKGALVLLKATRSGSLYV

Click here to download the sequence:
Link to NCBI Protein BLAST