Transcript Information: S_Transcript_69555.p1


Annotated TAIR IDAT3G11130.1
Annotated Gene NameClathrin, heavy chain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3482575-3491667 | Reverse length=1705
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 118.180881896455
Replicate 218.55596721732
Replicate 315.511311716628
Condition 2: 8 Hour
Replicate 129.608620871893
Replicate 229.483741575724
Replicate 335.40674475859
Condition 3: 24 Hour
Replicate 114.601580017397
Replicate 215.912381390972
Replicate 317.549233001875


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69555.p1 GENE.S_Transcript_69555~~S_Transcript_69555.p1 ORF type:5prime_partial len:950 (+),score=228.62,Clathrin|PF00637.16|4.8e-05,Clathrin|PF00637.16|1.6e-28,Clathrin|PF00637.16|3.7e-32,Clathrin|PF00637.16|3.3e-29,Clathrin|PF00637.16|2.1e-30,Clathrin|PF00637.16|6.4e-29 S_Transcript_69555:1-2850(+)
GAACGTGTAACTAGAGAGTCGAACTTTTATGATCCTGAGAAAACGAAAAATTTCTTGATGGAAGCCAAGCTTCCTGATGCACGTCCTCTTATCAATGTCTGTGATCGATTTGGTTTTGTTCCAGATCTCACACACTACCTATATACAAACAACATGCTTCGCTATATTGAAGGTTATGTTCAGAAGGTTAATCCGGGGAATGCACCACTAGTTGTTGGGCAGCTTCTTGATGATGAATGTCCCGAAGATTTCATTAAGGGACTGATACTATCTGTGCGCTCTTTGCTTCCAGTTGAGCCTCTTGTGGAGGAGTGTGAGAAAAGAAATCGGCTTCGTCTGCTGACTCAATTCCTTGAGCACCTGGTGAGTGAGGGAAGCCAAGATGTGCATGTGCACAATGCTCTTGGTAAAATTATTATTGAGAGTGGCAACAATCCAGAGCACTTCCTCACAACCAACCCATACTATGATTCACGTGTGGTGGGTAAGTACTGTGAAAAACGTGACCCTACCCTTGCCGTGGTTGCTTACAGGAGAGGACAATGTGATGATGAGCTTGTCAATGTGACGAATAAGAATTCTCTGTTCAAGCTGCAAGCTAGGTATGTTGTTGAGAGAATGGATGGTGATCTTTGGGAGAAAGTTCTCAATCCTGAAAATGAGTACAGGAGGCAGCTCATTGATCAAGTTGTGTCCACTGCTTTGCCTGAGAGCAAGAGTCCTGAACAAGTTTCCGCAGCAGTTAAAGCTTTTATGACAGCTGATCTCCCTCATGAGTTGATTGAGCTTCTTGAAAAGATTGTTCTACAGAACTCAGCATTTAGTGGGAACTCCAATCTGCAAAACCTGCTTATCTTGACTGCTATCAAAGCAGATTCATCTCGAGTTATGGATTATGTCAACAGGCTTGATAATTTTGATGGACCTGCAGTTGGAGAAGTAGCAGTTGAGGCTCAACTCTATGAAGAAGCATTTGCAATTTTCAAGAAATTCAATTTGAATGTGCAAGCTGTTAATGTGCTTTTAGATCATATTCAAAGCATTGATCGGGCTGTTGAGTTTGCATTCCGTGTTGAAGAAGATGCTGTTTGGAGCCAAGTCGCAAAGGCTCAGTTGAGGGCAGGACTTGTCAGTGATGCAATTGAGTCCTTCATACGTGCTGAAGACGCCTCTCAATTTTTGGAGGTGATTCGTGCTGCTGAGGATGCAAACGTCTACCATGACTTGGTGAAGTATCTTATTATGGTTAGACAACAAACAAAGGAGCCCAGGGTGGATAGTGAGCTCATTTATGCTTATGCTAAGACTGATAGGTTGACTGAAATTGAGGAATTCATCCTAATGCCAAATGTTGCCAACCTTCAAAATGTGGGTGACCGTTTGTTTGACGAAGCTTTATATGAAGCTGCAAAGATAATATATGCTTTCATTTCTAACTGGGCCAAGCTAGCTGTTACGTTAGTGAAGCTAAAGCAATTTCAAAGTGCTGTTGATGCAGCACGGAAAGCCAACAGTGCAAAGACTTGGAAGGAAGTGTGCTTTGCATGTGTTGATGCTGAAGAGTTCAGATTAGCTCAGATTTGTGGGCTGAATGTTATTATACAGGTGGATGATATGGAGGAGGTCAGCCAGTATTACCAAGACAGGGGCTGCTTTAATGAGATAATCTCATTGATGGAAAGTGGTTTGGGATTGGAACGTGCACACATGGGCATTTTTACTGAACTAGGAGTACTATACGCCAGATATCGATATGAGAAGCTCATGGAGCACATTAAGTTGTTTTCAACCCGGCTCAACATTCCCAAGCTTATCAGAGCATGCGATGAGCAGCAGCACTGGAAAGAACTCACTTATCTTTATATCCAGTACGATGAATTTGATAATGCTGCCAGTACTGTAATGAATCACTCTCCTGAGGCCTGGGATCATATGCAGTTCAAAGATATTGTGGTTAAAGTTGCGAATGTGGAGCTCTACTATAAAGCTGTGCACTTTTACCTTCAGGAGCATCCTGATCTTATAAATGATATGCTTAATGTGCTGGCTCTTCGTCTAGACCATACACGTGTAGTTGACATAATGCGAAAGGCAGGAAGTCTGCTTCTTATCAAACCATATATGATAGCTGTCCAGAGCAATAACGTCTCTGCTGTAAATGAGGCTTTGAATGAAATATATGTAGAGGAGGAAGACTATGAAAGATTGCGAGAGTCAATTGATTTGCATGATAATTTTGATCAAATTGGACTTGCACAAAAGATTGAGAAACATGAGCTTCTTGAGATGAGACGTGTTGCTGCTTATATCTACAAGAAGGCAGGTAGATGGAAGCAGTCTATTGCATTGTCGAAAAAAGACAAACATTACAAGGATGCAATGGAAACGTGCTCTCAATCTGGTGATCGTGAGTTGGCAGAAGAGTTGCTGGTCTATTTCATTGAAGAGGGGAAGGAGTGCTTTGCTGCATGCCTTTTTGTTTGTTATGATGTAATCCGGCCCGATGTTGCCCTTGAACTTTCCTGGATGAATAATATGATAGACTTTGCATTCCCATACTTACTCCAGTTTATCCGAGAGTACACAGGCAAAGTAGATGAGCTTATTAAGGATAAAATTGAAGCCCAGAATGAAGCAAAGGCTAAAGAGCAGGAGGAGAAGAATGTGATTGCTCAACAGAATATGCATGCACAGTTGCTACCGCTTGCGTTACCAGCACCACCAATGCCGGGAGCAGGACCTCCACCCGGAATGGGAGGTTTTGCACCTCCACCCCCGATGGGAGGAATGGGGGGAATGGGGATGTCCCCTATGCCTCCTTTTGGCATGCCACCAATGGGAGGCTACTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69555.p1 GENE.S_Transcript_69555~~S_Transcript_69555.p1 ORF type:5prime_partial len:950 (+),score=228.62,Clathrin|PF00637.16|4.8e-05,Clathrin|PF00637.16|1.6e-28,Clathrin|PF00637.16|3.7e-32,Clathrin|PF00637.16|3.3e-29,Clathrin|PF00637.16|2.1e-30,Clathrin|PF00637.16|6.4e-29 S_Transcript_69555:1-2850(+)
ERVTRESNFYDPEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIESGNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELVNVTNKNSLFKLQARYVVERMDGDLWEKVLNPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNSNLQNLLILTAIKADSSRVMDYVNRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDHIQSIDRAVEFAFRVEEDAVWSQVAKAQLRAGLVSDAIESFIRAEDASQFLEVIRAAEDANVYHDLVKYLIMVRQQTKEPRVDSELIYAYAKTDRLTEIEEFILMPNVANLQNVGDRLFDEALYEAAKIIYAFISNWAKLAVTLVKLKQFQSAVDAARKANSAKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDMEEVSQYYQDRGCFNEIISLMESGLGLERAHMGIFTELGVLYARYRYEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAASTVMNHSPEAWDHMQFKDIVVKVANVELYYKAVHFYLQEHPDLINDMLNVLALRLDHTRVVDIMRKAGSLLLIKPYMIAVQSNNVSAVNEALNEIYVEEEDYERLRESIDLHDNFDQIGLAQKIEKHELLEMRRVAAYIYKKAGRWKQSIALSKKDKHYKDAMETCSQSGDRELAEELLVYFIEEGKECFAACLFVCYDVIRPDVALELSWMNNMIDFAFPYLLQFIREYTGKVDELIKDKIEAQNEAKAKEQEEKNVIAQQNMHAQLLPLALPAPPMPGAGPPPGMGGFAPPPPMGGMGGMGMSPMPPFGMPPMGGY*

Click here to download the sequence:
Link to NCBI Protein BLAST