Transcript Information: S_Transcript_69558.p1


Annotated TAIR IDAT3G11130.1
Annotated Gene NameClathrin, heavy chain
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr3:3482575-3491667 | Reverse length=1705
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 134.462097187713
Replicate 248.217289269896
Replicate 346.408192105792
Condition 2: 8 Hour
Replicate 153.139248747758
Replicate 250.884989062908
Replicate 353.167714655235
Condition 3: 24 Hour
Replicate 146.63454294193
Replicate 239.106184680756
Replicate 340.42945353173


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69558.p1 GENE.S_Transcript_69558~~S_Transcript_69558.p1 ORF type:internal len:1224 (+),score=294.86,Clathrin|PF00637.16|2.3e+03,Clathrin|PF00637.16|1.4e-21,Clathrin|PF00637.16|1e-20,Clathrin|PF00637.16|1.8e-28,Clathrin|PF00637.16|2e-31,Clathrin|PF00637.16|5e-28,Clathrin|PF00637.16|1.8e-31,Clathrin_H_link|PF13838.2|2.8e-30,Clathrin-link|PF09268.6|1.3e-09,Clathrin-link|PF09268.6|1.5e+03 S_Transcript_69558:1-3669(+)
AAGACATCCAATGCAGGACAAGTTACTTCAAAGTTACATGTTATTGAACTGGGTGCCCAGCCAGGAAAACCCGGATTTTCTAAGAAACAAGCCGATCTCTTTTTCCCTCCTGACTTTGCGGACGACTTTCCTGTGTCGATGCAGATATCTCAGAATTATGGTTTGATATTTGTCATCACCAAGCTTGGGCTCCTTTTTGTATATGACTTGGAGACTGCTAGTGCAGTTTACAGAAACCGCATCAGTCCAGATCCGATCTTCTTGACATCAGAGGCATCTTCAGTTGGTGGGTTTTATGCTGTCAACAGGCGAGGTCAGGTCCTTCTAGCCACTGTAAATGAAGCAACTATTGTGCCATTTGTCAGTGGACAGCTGAACAATCTAGAGCTTGCAGTTAATCTTGCCAAGCGAGGAAACCTTCCTGGTGCTGAAAACCTGGTTGTCCAGCGGTTCCAGGAGTTGTTTGCTCAGACCAAGTATAAGGAGGCAGCCGAGCTTGCTGCGGAATCTCCGCAGGGTATTTTGCGTACCCCTGATACTGTTGCCAAGTTCCAGAGTGTTCCTGTGCAAGCTGGGCAAACACCACCATTGTTGCAATACTTTGGAACTTTGTTAACCAGAGGAAAGCTCAATGCCTTTGAGTCACTCGAATTGTCTAGATTAGTTGTGAATCAAAACAAAAAGAATCTCTTAGAGAATTGGTTGGCTGAGGACAAGCTTGAATGTAGTGAGGAGCTTGGAGATCTTGTGAAGACTGTTGATAATGACCTTGCTCTCAAAATATACATCAAGGCTAGGGCAACTCCCAAGGTTGTTGCTGCTTTTGCTGAGAGGAGGGAATTTGATAAGATTCTCATATACTCAAAGCAGGTCGGATACACCCCTGATTACTTGTTCCTTCTTCAAACGATTTTGCGCTCCGACCCACAGGGTGCTGTTAACTTTGCTTTGATGATGTCTCAAATGGAGGGAGGATGTCCTATTGACTACAATACTATCACTGATCTGTTCCTTCAGAGGAATATGATTCGTGAGGCAACAGCATTTTTGTTGGATGTCCTGAAGCCCAATTTACCAGAACATGGGTACCTCCAAACAAAGGTGTTGGAAATTAATCTTGTGACATTTCCAAATGTTGCTGATGCCATCTTAGCTAATGGCATGTTCAGCCATTATGACCGCCCTCGGATTGCACAATTATGTGAAAAAGGTGGCCTTTATTTGCAAGCTCTCAAGCATTATACCGAGTTGCCTGATATAAAGCGTGTCATTGTTAACACACATGCCATTGAGCCACAGGCACTTGTTGAGTTCTTTGGAACTCTTTCTAAAGAATGGGCTTTGGAATGCATGAAAGATCTTTTACTTGTCAATCTCAGAGGCAATCTCCAGATAATTGTCCAGGTTGCCAAAGAATATTGTGAGCAGTTGGGTACAGATGCCTGTGTAAAACTTTTTGAGCAATTCAAGTCTTACGAAGGATTATATTTCTTCTTGGGTTCATATTTGAGCTCCAGTGAGGATCCAGAAATTCACTTCAAGTACATTGAAGCAGCAGCGAAAACTGGGCAAATTAAGGAAGTGGAACGTGTAACTAGAGAGTCGAACTTTTATGATCCTGAGAAAACGAAAAATTTCTTGATGGAAGCCAAGCTTCCTGATGCTAGGCCTCTGATAAATGTGTGTGACCGTTTCGGGTTTGTACCAGATCTGACTCACTACCTCTACAAGAGCAACATGCTTCGTTACATTGAAGGTTATGTGCAGAAGGTCAACCCTAGCAATGCCCCTCTAGTCGTAGGGCAACTGCTGGATGATGAATGTCCTGAAGACTTTATTAAAGGTCTCATTCTCTCTGTACGTTCACTCCTTCCTGTGGAGCCCCTTGTGGAGGAATGTGAGAAAAGGAATCGTCTGCGCCTGCTTACTCAGTTTTTGGAACACCTTGTCAGTGAGGGAAGTACTGATGTACATGTGCACAATGCTCTGGGTAAAATTATAATTGACAGCAATAACAACCCAGAGCATTTTCTCACTACCAATCCATACTATGACTCCCGTGTTGTGGGTAAATATTGTGAGAAAAGGGATCCTACTCTTGCTGTTGTTGCTTATCGACGTGGACAGTGTGATGATGAGCTCATTAATGTCACAAATAAGAACTCTCTCTTTAAACTGCAAGCCAGGTATGTTGTGGAAAGAATGGATGGTGATCTATGGGAGAAAGTTCTCAGTCCAGACAATGAATACAAAAGGCAAGTAATAGATCAAGTTGTCTCAACTGCGTTGCCAGAAAGCAAGAGCCCAGAGCAAGTTTCTGCAGCTGTTAAGGCCTTTATGACTGCTGATCTTCCCCACGAGCTGATTGAACTTCTTGAAAAGATTGTGCTTCAAAATTCTGCTTTCAGTGGCAACTTCAATTTGCAAAATCTACTGATCTTAACTGCTATCAAGGCAGATCCCTCGAGAGTGATGGATTACATCAATAGGCTGGACAATTTTGATGGTCCTGCAGTTGGAGAAGTGGCCGTGGAGGCACAATTGTATGAGGAAGCCTTCGCCATCTTCAAGAAGTTCAACTTAAACGTCCAGGCTGTGAATGTGCTGCTAGATAATCTCCGTAGCATTACCCGGGCTGTTGAGTTTGCATTCCGAGTTGAAGAGGATGCTGTATGGAGTCAGGTGGCTAAGGCCCAACTGAGGGAAGGCCTGGTCAGCGATGCTATTGAATCCTTTATTCGTGCTGAGGATGCAACCCATTTCTTGGAAGTGATTAAAGCTTCTGAAGATGCAGAGGTTTATGATGACTTGGTCAAGTATCTGCAGATGGTTAGACAGAAGGTGAAGGAGCCCAAAGTTGACAGTGAGCTCATATATGCATATGCAAAGATTGGTAAACTAGCTGAAATTGAAGAGTTCATTCTTATGCCAAATGTTGCCAATCTTCAAAATGTTGGTGATCGTTTATACGATGAAGCCTTATACGAAGCTGCAAAGATCATATATACATTCATCTCTAATTGGGCTAAGCTAGCTGTCACACTTGTCAAGTTGAAACAATTCCAAGGTGCCGTTGATGCAGCTCGCAAGGCCAACAGCTCAAAGACGTGGAAGGAAGTTTGCTTCGCTTGTGTGGATGCGGAGGAGTTTCGACTGGCTCAAATATGTGGTCTTAATGTTATCATACAGGTGGATGACCTGGAGGAGGTCAGCGAATATTACCAGAAGAGGGGCTGCTTCAATGAGCTCATCTCTCTTATGGAAAGTGGATTGGGATTGGAGCGTGCACATATGGGTATCTTTACCGAGTTGGGAGTTCTGTACGCCAGATATCGTCCTGAGAAGCTCATGGAGCATATCAAGCTCTTTTCAACTAGGCTTAACATACCTAAGCTGATTAGGGCTTGTGATGAGCAGCAGCACTGGAAAGAACTCACTTATCTTTATATCCAGTACGATGAATTTGATAATGCTGCCAGTACTGTAATGAATCACTCTCCTGAGGCCTGGGATCATATGCAGTTCAAAGATATTGTGGTTAAAGTTGCGAATGTGGAGCTCTACTATAAAGCTGTGCACTTTTACCTTCAGGAGCATCCTGATCTTATAAATGATATGCTTAATGTGCTGGCTCTTCGTCTAGACCATACACGTGTAGTTGACATAATG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69558.p1 GENE.S_Transcript_69558~~S_Transcript_69558.p1 ORF type:internal len:1224 (+),score=294.86,Clathrin|PF00637.16|2.3e+03,Clathrin|PF00637.16|1.4e-21,Clathrin|PF00637.16|1e-20,Clathrin|PF00637.16|1.8e-28,Clathrin|PF00637.16|2e-31,Clathrin|PF00637.16|5e-28,Clathrin|PF00637.16|1.8e-31,Clathrin_H_link|PF13838.2|2.8e-30,Clathrin-link|PF09268.6|1.3e-09,Clathrin-link|PF09268.6|1.5e+03 S_Transcript_69558:1-3669(+)
KTSNAGQVTSKLHVIELGAQPGKPGFSKKQADLFFPPDFADDFPVSMQISQNYGLIFVITKLGLLFVYDLETASAVYRNRISPDPIFLTSEASSVGGFYAVNRRGQVLLATVNEATIVPFVSGQLNNLELAVNLAKRGNLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGILRTPDTVAKFQSVPVQAGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLVKTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRSDPQGAVNFALMMSQMEGGCPIDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHGYLQTKVLEINLVTFPNVADAILANGMFSHYDRPRIAQLCEKGGLYLQALKHYTELPDIKRVIVNTHAIEPQALVEFFGTLSKEWALECMKDLLLVNLRGNLQIIVQVAKEYCEQLGTDACVKLFEQFKSYEGLYFFLGSYLSSSEDPEIHFKYIEAAAKTGQIKEVERVTRESNFYDPEKTKNFLMEAKLPDARPLINVCDRFGFVPDLTHYLYKSNMLRYIEGYVQKVNPSNAPLVVGQLLDDECPEDFIKGLILSVRSLLPVEPLVEECEKRNRLRLLTQFLEHLVSEGSTDVHVHNALGKIIIDSNNNPEHFLTTNPYYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARYVVERMDGDLWEKVLSPDNEYKRQVIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIELLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYINRLDNFDGPAVGEVAVEAQLYEEAFAIFKKFNLNVQAVNVLLDNLRSITRAVEFAFRVEEDAVWSQVAKAQLREGLVSDAIESFIRAEDATHFLEVIKASEDAEVYDDLVKYLQMVRQKVKEPKVDSELIYAYAKIGKLAEIEEFILMPNVANLQNVGDRLYDEALYEAAKIIYTFISNWAKLAVTLVKLKQFQGAVDAARKANSSKTWKEVCFACVDAEEFRLAQICGLNVIIQVDDLEEVSEYYQKRGCFNELISLMESGLGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYIQYDEFDNAASTVMNHSPEAWDHMQFKDIVVKVANVELYYKAVHFYLQEHPDLINDMLNVLALRLDHTRVVDIM

Click here to download the sequence:
Link to NCBI Protein BLAST