Transcript Information: S_Transcript_69561.p1


Annotated TAIR IDAT5G19060.1
Annotated Gene NameCONTAINS InterPro DOMAIN/s: Immunoglobulin-like fold (InterPro:IPR013783); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G06150.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr5:6373011-6374666 | Forward length=551
E-Value3.5E-242
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 111.660820329196
Replicate 211.070374972322
Replicate 312.056205567018
Condition 2: 8 Hour
Replicate 19.1932778045591
Replicate 29.1305601338814
Replicate 38.8502194119622
Condition 3: 24 Hour
Replicate 19.9575617324617
Replicate 212.493125815937
Replicate 311.630660052536


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69561.p1 GENE.S_Transcript_69561~~S_Transcript_69561.p1 ORF type:complete len:566 (+),score=94.15 S_Transcript_69561:351-2048(+)
ATGATAGAGATGATGAAGTCTGAAAAGTTAGCTAACTCGGCAACTCAGCTACCGATTCTGGGGTTAACTCGGCGAGTTGGGGTTCTAGTGGCAGCAACTATTTTGGCAATGTTGTTGGTTTGGAGCATTGATCACTCTACAGTTACCATTGTTTTGGAGATTTGGAGAACTGAAAACCCAGATGAAGGTGGCCCAGTTTCTGGTGAGCTACTTGACCCACCACAATGGGATATTGACCCGGTGAAGGCGGGTTCGGGTTTGGGCTGGGTTTCGGTGGAGCTTGAGAAGAACTACAGCTCAAGGTTTTTATCTAGGTGGTTGGCACCAGGGGGTGAACCTTGTAAGGAGTCGAAAACGGCTGAGATTAAGTTTGTGAACTTTGATGAGGAAAACCCAATTATGTTATCAAGTGGGAAATCTCATGAGGTGGTTTTTCAAGCATTGGATGAGTCAGGAAATGTTGTTTGTGTAGGAGGAGATTATTTTGAAATTGATTTGGCTGGGGAATTATGGAGATCAAGACCACCAATTAAGGATTTGGGTAATGGGACTTACTCATTTACCCTCCAAGTTCATCCTGATTTTGCTGGTTCTTATAACCTTACAATTATCCTGCTTTTCCGACATTTCGAGGGCCTTAAGATCTCAACTGCTAGATTTGGGTATGATAAGCTACTCAGAAGGATACCTGTTGTGTTTTCAGAAAGTGAACACAATTTGCCTGAATTGAGGTTGTGTAGCAAGTCTGATTTCGAAAGAGATCTTTGGGCCGGGAGGTGGACAAGGCATGCTAACAATGATGCTTGTGAAATTAGCAATGATGGTCGGTATAGGTGCTTGGAGCCTAACTATCCTTGCACAAACCCTTGGTGTAATGGCTCTTTAGGCATGCTCGAGAGTAATGGTTGGGTTTACTCTGCCCATTGCTCATTTAGACTGTTCTCGTCTAATGATGCTTGGAATTGCTTGAACAACCGATGGCTCTTCTTTTGGGGTGACTCAAATCATGTAGACACAATTCGGAACATTTTGTTCTTCTTTCTTGATGTGCCATACCAAGAGCTGCAAGAAGTAGGAAGGCGTTTTGACAAGATTTTTACCAACCCCAAAGACGGATCTCAGTCCGTAAGGATTACAAACATCTTCAATGGTCATTGGGAAGAAACCAAGAACTACCAAGGCCTTAATTCACTGTCAGATGAAGGGTATCGGGATTTGCTCAAGAGCTTCTTCAATGGCTCTTTTGTACCGGACACAATAATCTTCAATTCAGGTCTACATGATGGTATCTATTGGCGTAATGTTAGGAGATTCATTGGTGGTGCAGATTATGCAGCATCATTCTGGAAAGGGATAATGGATGGGGTGAAAGCGAGGGGATTAGAGGTATCGAACTTCATTTTCAGGTCGACAATTACAACTGGAGGGTATGCTCGAACTATGGCATTCAATCCCAGTAAGATGGAGGTGTTCAACGGGATCTTACTGGACAAATTGAGATCAGCTGGGCTGGTTACCGGAGTTATAGATGATTTCGACTTGACATGGGCATGGCATTTTGATAATAGGTGCAATGATGGCGTACATTATGGAAGGTTTCCAGCAAAAATGAAATGGAGAGACGGGCAAATCGGGCACCAATATTTTGTGGATTTGATGCTTGGACAAGTTCTTCTGAATGCCATTTGCCCCAGTTAA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69561.p1 GENE.S_Transcript_69561~~S_Transcript_69561.p1 ORF type:complete len:566 (+),score=94.15 S_Transcript_69561:351-2048(+)
MIEMMKSEKLANSATQLPILGLTRRVGVLVAATILAMLLVWSIDHSTVTIVLEIWRTENPDEGGPVSGELLDPPQWDIDPVKAGSGLGWVSVELEKNYSSRFLSRWLAPGGEPCKESKTAEIKFVNFDEENPIMLSSGKSHEVVFQALDESGNVVCVGGDYFEIDLAGELWRSRPPIKDLGNGTYSFTLQVHPDFAGSYNLTIILLFRHFEGLKISTARFGYDKLLRRIPVVFSESEHNLPELRLCSKSDFERDLWAGRWTRHANNDACEISNDGRYRCLEPNYPCTNPWCNGSLGMLESNGWVYSAHCSFRLFSSNDAWNCLNNRWLFFWGDSNHVDTIRNILFFFLDVPYQELQEVGRRFDKIFTNPKDGSQSVRITNIFNGHWEETKNYQGLNSLSDEGYRDLLKSFFNGSFVPDTIIFNSGLHDGIYWRNVRRFIGGADYAASFWKGIMDGVKARGLEVSNFIFRSTITTGGYARTMAFNPSKMEVFNGILLDKLRSAGLVTGVIDDFDLTWAWHFDNRCNDGVHYGRFPAKMKWRDGQIGHQYFVDLMLGQVLLNAICPS*

Click here to download the sequence:
Link to NCBI Protein BLAST