Transcript Information: S_Transcript_6959.p1


Annotated TAIR IDAT5G22750.1
Annotated Gene NameDNA/RNA helicase protein
Annotated Gene Symbol(s)RAD5, RAD5A
Annotation TypeOrtholog
Chromosome Positionchr5:7565374-7570871 | Reverse length=1029
E-Value0
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 14.4825196426747
Replicate 23.7940721736127
Replicate 33.4322170803403
Condition 2: 8 Hour
Replicate 14.6217571476472
Replicate 25.6127252771046
Replicate 36.1512163288815
Condition 3: 24 Hour
Replicate 13.7308693829637
Replicate 24.0842911321333
Replicate 33.4164135531076


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6959.p1 GENE.S_Transcript_6959~~S_Transcript_6959.p1 ORF type:5prime_partial len:849 (+),score=200.55,SNF2_N|PF00176.19|5.8e-89,Helicase_C|PF00271.27|1.1e-15,zf-C3HC4_3|PF13920.2|1.6e-10,zf-RING_2|PF13639.2|2.6e-09,zf-C3HC4|PF00097.21|2.8e-09,zf-C3HC4_2|PF13923.2|1.3e-07,zf-RING_5|PF14634.2|4.9e-06 S_Transcript_6959:2-2548(+)
TGGGCAAGGTGTTTGGTGCCTTTGGTTAGAGATAAGAAGATTAAAATTGAAGGATTTTGTAAATATGCTCCTGAAACTTTGAGTATTATGGACACCATTGCCTTAAACGTGAGTGTATATATAAACAGCGCATTGTTCCGGAAGCACCATCAGAATTCACTGAAAGCAAATGCTAACTCTAATTCCAATGAGGAATCTGTTATTCATCCCCTGCCAACTTTGTTTAAGCTGCTTGGGATAGTCCCTTTTAAGAAGGCAGAGTTCACTCCTGACAATTTATGCACACGGAAACGGCCTTTGACTTCTGAGGATGGTGCAGCTCTACACGCCTCATTGTTGAAGATTAAAAGTCCAAAGAATTTGCCGCCTAATGGAAATAAAAATGAAGAGGAGGAGGGTCAGGCTGTATCAGATTCTGATGTTGACACCATTGTTGGAGTTGGAGATAGCTCCAAGATGGAGGAAATGGAACCTCCAAGCACCCTTCAGTGTGAACTCCGCCCTTATCAAAAACAGGCACTTCACTGGATGGTCCATTTGGAGAAGGGGCAGACCATGGACGAGGCTGCAACTACCCTGCACCCATGTTGGGAAGCATATCACCTTGCTGACAAGAGGGATCTTGCTATCTACTTGAATTCATTTTCTGGTGAAGCCACGACAGAATTTCCAAGTACTCTTCAAATGGCAAGAGGAGGGATTTTGGCTGATGCTATGGGGCTTGGGAAGACTGTCATGACCATATCTCTCCTCCTTGCAAATTCAGAGAGAGCTAGATCACCTTCTAGTCAGTTGGCTAGCCAATCATCTGGAGAGAGTACTGAGCTCTGTGAAGCCATTGATGCCTCTCCAGATCCTCCTAAGAAGGCTGTAAAGTTTCAGGGATTTGATAAGCTATCAAGGCAAGAGAGTGTTCTCAGAGATGGTGGCAGTCTAATTGTTTGTCCTATGACACTCTTGAGTCAGTGGAAGACAGAGATTGAAACTCATGCTCAACCTGGTTGCCTATCTGTTTATGTTCATTATGGACAGAGCAGATCAAGGGATGCTGAACTTTTAGCTCAAAATGATGTTGTCCTCACTACCTATGGGCTGTTGACTTCAGAATTTACGTCTGAGAGTACTCAAGATCGTGGCGCTCTCTATTCTATACGGTGGTCAAGAGTTGTGCTTGATGAGGCACATACAATTAAGAACTCTAAAAGCCAAATTTCTATGGCTGCAGCTGCCTTGACAGCTGATCGTAGATGGTGTCTCACTGGCACTCCTATTCAGAACAATCTTGAGGACATATTCAGTCTTCTTCGGTTTCTGAAGGTGGAGCCATGGGGAAATTGGGCATGGTGGAACAAACTCATTCAAAAACCATTTGAAGAGGGTGATGAAAGAGGGTTGAAATTAGTGCAGTCCATTCTGAGACCGATAATGTTAAGAAGAACAAAGTATAGTGTTGACCGTGAAGGAAGGCCAATTTTAGTCCTTCCTCCAGCAAATGTTCAGGTGATTTACTGTGAGCTAACTGAAGCTGAAAAGGACTTCTACGAGGCTTTGTTTAAAAAATCTAAGGTGAAGTTTGATCAATTTGTTGAGCAAGGAAGAGTCCTGCATAATTATGCTTCTATATTGGAATTACTGTTACGACTGCGGCAATGTTGTGACCATCCGTTTCTTGTCATGAGTCGAGGTGATACAAAAGATTTTTCTGACCTGGATAAGCTTGCAAAACGTTTTCTGAGAGGTGGCCAAAGAGCTACTGAAGGTGAAGACAATGTTGTGCCATCAAAAGCATATATTCAGGAGGTTGTTGAAGAGCTACGGAAAGGGGAGCAGGGAGAATGCCCGATATGTCTTGAAGCTTTTGAAGATGCAGTATTGACTCCTTGTGCTCACCGCTTATGCCGAGAATGTCTGTTGGCAAGTTGGCGAATTGCTGCTTCTGGTTCATGTCCTGTTTGCAGGAAAATAATAAGCAGGCAAGATCTCATCACAGCTCCAACTGAGAACAGATTTCAGATTGATGTTGAGAAAAATTGGGTTGAGTCAACTAAAGTCTCGTCATTATTACGTGAACTTGAAGATCTGCGTTCATCAGGATCGAAGAGCATCATCTTTAGCCAGTGGACTGCCTTCTTGGACCTATTACAGATACCACTTGCACAGAATAACATATCCTTTCTTCGTCTTGATGGAACTCTAAGTCAACAGCAACGTGAGAGAGTAATAAAGAACTTTTCTGAGGATAACAATATTTCGGTTTTGTTGATGTCCTTGAAAGCTGGTGGAGTGGGAATAAACCTAACAGCAGCTTCCAATGCTTTTGTTGTAGATCCATGGTGGAACCCAGCGGTAGAGGAGCAAGCAGTCATGCGAATTCATCGCATCGGCCAAACTAAACCTGTTTCTATAAAAAGATTCATCGTCAAGGGAACAGTAGAGGAAAGAATGGAGGCAGTGCAGGCAAGAAAGCAAAGGATGATCTCTGGTGCCTTGACTGATCAAGAAGTTCGAAGTGCACGTATAGAGGAGTTGAAGATGCTTTTCACGTAG

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6959.p1 GENE.S_Transcript_6959~~S_Transcript_6959.p1 ORF type:5prime_partial len:849 (+),score=200.55,SNF2_N|PF00176.19|5.8e-89,Helicase_C|PF00271.27|1.1e-15,zf-C3HC4_3|PF13920.2|1.6e-10,zf-RING_2|PF13639.2|2.6e-09,zf-C3HC4|PF00097.21|2.8e-09,zf-C3HC4_2|PF13923.2|1.3e-07,zf-RING_5|PF14634.2|4.9e-06 S_Transcript_6959:2-2548(+)
WARCLVPLVRDKKIKIEGFCKYAPETLSIMDTIALNVSVYINSALFRKHHQNSLKANANSNSNEESVIHPLPTLFKLLGIVPFKKAEFTPDNLCTRKRPLTSEDGAALHASLLKIKSPKNLPPNGNKNEEEEGQAVSDSDVDTIVGVGDSSKMEEMEPPSTLQCELRPYQKQALHWMVHLEKGQTMDEAATTLHPCWEAYHLADKRDLAIYLNSFSGEATTEFPSTLQMARGGILADAMGLGKTVMTISLLLANSERARSPSSQLASQSSGESTELCEAIDASPDPPKKAVKFQGFDKLSRQESVLRDGGSLIVCPMTLLSQWKTEIETHAQPGCLSVYVHYGQSRSRDAELLAQNDVVLTTYGLLTSEFTSESTQDRGALYSIRWSRVVLDEAHTIKNSKSQISMAAAALTADRRWCLTGTPIQNNLEDIFSLLRFLKVEPWGNWAWWNKLIQKPFEEGDERGLKLVQSILRPIMLRRTKYSVDREGRPILVLPPANVQVIYCELTEAEKDFYEALFKKSKVKFDQFVEQGRVLHNYASILELLLRLRQCCDHPFLVMSRGDTKDFSDLDKLAKRFLRGGQRATEGEDNVVPSKAYIQEVVEELRKGEQGECPICLEAFEDAVLTPCAHRLCRECLLASWRIAASGSCPVCRKIISRQDLITAPTENRFQIDVEKNWVESTKVSSLLRELEDLRSSGSKSIIFSQWTAFLDLLQIPLAQNNISFLRLDGTLSQQQRERVIKNFSEDNNISVLLMSLKAGGVGINLTAASNAFVVDPWWNPAVEEQAVMRIHRIGQTKPVSIKRFIVKGTVEERMEAVQARKQRMISGALTDQEVRSARIEELKMLFT*

Click here to download the sequence:
Link to NCBI Protein BLAST