Transcript Information: S_Transcript_69686.p1


Annotated TAIR IDAT4G21770.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeHomolog
Chromosome Positionchr4:11564028-11566345 | Reverse length=472
E-Value4E-32
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 11.8567210164079
Replicate 22.3602053945248
Replicate 32.9165257062438
Condition 2: 8 Hour
Replicate 11.9837572388031
Replicate 21.456771539331
Replicate 31.4871521584871
Condition 3: 24 Hour
Replicate 11.6256657481372
Replicate 22.529913850383
Replicate 30.8211828410968


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69686.p1 GENE.S_Transcript_69686~~S_Transcript_69686.p1 ORF type:3prime_partial len:215 (+),score=38.29 S_Transcript_69686:65-643(+)
ATGGCAACTGGAGCGGCTAACTTCAGTTCAATGATCTTCACCAACACCTTAATCTCATCACTACGGAGCACCCATCTCCGGTTAACCGGAGCTCCGGTTTCTCTCCGGCGCACAGTAGCCACCACCACCACCACCAATGTTCCCAAGAACAACAAGAAGCTTAAGAGACAGAAATGGGGTTGTTCTGCTTCAACCTTAAAGACCGAACCCATTGTTTCTGACCCTAAACTTCCTGATGCTCTCAAAGTTCCTGATCCCACTTCGAATGGTTATCCTGAATATGATCGCCTGTTACCCTGCCCCTCAGCTAATTTCCCGCCTAGGGTTGAACACTTGGTAGTCTTGGAGCAAAGTCCTGTTTCGGATTACATTAGCAAAGCTTTGGATCTCCCACCTCTGTATGCTGCTGATCTCATCCGTTTTGGAGCTGTGTATTATGCCCTTGTATGTCCAGACCCCCCAGTAACGGCTACTCCTGAGCAAATCAGACTGTATAAGCAATTTACTTCACCTGAAAATCTGAAGCAACGGCAATCAATCAAGGGGAAAACTGTTCGAGAAGCACAAAAAACTTTCAGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69686.p1 GENE.S_Transcript_69686~~S_Transcript_69686.p1 ORF type:3prime_partial len:215 (+),score=38.29 S_Transcript_69686:65-643(+)
MATGAANFSSMIFTNTLISSLRSTHLRLTGAPVSLRRTVATTTTTNVPKNNKKLKRQKWGCSASTLKTEPIVSDPKLPDALKVPDPTSNGYPEYDRLLPCPSANFPPRVEHLVVLEQSPVSDYISKALDLPPLYAADLIRFGAVYYALVCPDPPVTATPEQIRLYKQFTSPENLKQRQSIKGKTVREAQKTFR

Click here to download the sequence:
Link to NCBI Protein BLAST