Transcript Information: S_Transcript_69691.p2


Annotated TAIR IDAT4G21770.1
Annotated Gene NamePseudouridine synthase family protein
Annotated Gene Symbol(s)
Annotation TypeOrtholog
Chromosome Positionchr4:11564028-11566345 | Reverse length=472
E-Value2.6E-110
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 12.0564591863549
Replicate 21.805137327433
Replicate 31.425120515551
Condition 2: 8 Hour
Replicate 13.0049413628687
Replicate 21.9321142007037
Replicate 33.1973771407472
Condition 3: 24 Hour
Replicate 10.99294924957246
Replicate 22.0603465069407
Replicate 31.4903935330296


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_69691.p2 GENE.S_Transcript_69691~~S_Transcript_69691.p2 ORF type:complete len:220 (+),score=40.17,PseudoU_synth_2|PF00849.18|1.1e-15 S_Transcript_69691:1058-1717(+)
ATGACTACACATCAGATCGATAACTGCACTGAAGGATGTGTTGTGCTTGCCAGAAGCGAGGAGTTTTGCTCTGTTTTTCATCGAAAGATCAGAGACAAAGAGGTCAAGAAACTCTGTCTTGCACTTGCTACATCTCCAGTATCACGTGGAGCAATCATCCATTATATGTCTCCGGCTAGTCGTGCTCCGCGAGTAATTTCAGAAGAATACATGGAAGGATGGCAGTTGTGCCAGCTTGAAGTTCTGGATTGCAAGGAAGTTCCCTGGCCAAACTCTGCCATTGAGGAGAGGTATCAAATCCAGGATTGCGAGTGGCCTGTAAAGAAATATGCTTATGAATATAGAATCAATCTTGTGACTGGCCGAACACATCAGATTCGAGCACAATTCGCAGCCTGTGGGGCACCTATTGTTGGTGATTCAATGTACATGCCTGCTGCGTTGGCAGAATTAACCAACCCTGGCATTAATCCCTTTGGTAAACTCAAAAGAGAATATTCATGTGAGGATGAAAGACAAGTTGCCATTAAGAATTGGATTTCGTTGCATGGAAAGGAGCCTACCATTGCCATTGGTCTCCAAGCATGTCAAATTTCTTGGGATGACGATGAACATATTCATGAAGCTGGATCGCCTTGGTGGAGATGGGACCATATTTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_69691.p2 GENE.S_Transcript_69691~~S_Transcript_69691.p2 ORF type:complete len:220 (+),score=40.17,PseudoU_synth_2|PF00849.18|1.1e-15 S_Transcript_69691:1058-1717(+)
MTTHQIDNCTEGCVVLARSEEFCSVFHRKIRDKEVKKLCLALATSPVSRGAIIHYMSPASRAPRVISEEYMEGWQLCQLEVLDCKEVPWPNSAIEERYQIQDCEWPVKKYAYEYRINLVTGRTHQIRAQFAACGAPIVGDSMYMPAALAELTNPGINPFGKLKREYSCEDERQVAIKNWISLHGKEPTIAIGLQACQISWDDDEHIHEAGSPWWRWDHI*

Click here to download the sequence:
Link to NCBI Protein BLAST