Transcript Information: S_Transcript_6979.p1


Annotated TAIR IDAT4G19170.1
Annotated Gene Namenine-cis-epoxycarotenoid dioxygenase 4
Annotated Gene Symbol(s)NCED4, CCD4
Annotation TypeOrtholog
Chromosome Positionchr4:10481835-10483622 | Forward length=595
E-Value1.4E-121
Link to Arabidopsis eFP Browser 2.0


Transcripts Per Million


Condition 1: 0 Hour
Replicate 1175.08553444198
Replicate 2178.46742322233
Replicate 3174.42198984328
Condition 2: 8 Hour
Replicate 136.693485363488
Replicate 227.172285797239
Replicate 339.783828930755
Condition 3: 24 Hour
Replicate 1292.29692281949
Replicate 2232.51052038245
Replicate 3304.80891720353


Fold Change




FASTA Sequences

Nucleotide Sequence

>S_Transcript_6979.p1 GENE.S_Transcript_6979~~S_Transcript_6979.p1 ORF type:5prime_partial len:247 (+),score=40.40,RPE65|PF03055.11|3.2e-46 S_Transcript_6979:3-743(+)
ATTGGGATGGACCCTCTAGGAATGCTAAGGGGCGGATCTCCAGTGGGTTTGAACCCATCAAAGGTGTCTCGGGTTGGAGTCATCCCAAGGTATGCTAGTGATGAGAAGGATATGAGGTGGTTCGATGTGCCAGGGTTCAACATAATTCATGCTATCAATGCATGGGATGAGATTGATGAGAATGGGAACGAAACCATTGTCATGGTAGCTCCTAACATATTATCCGCTGAACACACATTGGATAAACTAGAGCTTGTTCACGCACTAGTGGAAAAAGTCAGGATTAATCTACGGACTGGGGTTGTAAGTAGACAACCATTATCAGCAAGGAATCTCGACTTTGGAGTCATAAATCCGGCCTACATGGGGAAGAAGAACAAGTATGTCTACGCAGCCGTTGGTGATCCAATGCCCAAAGTTACAGGGGTTGTGAAGATGGATGTGTTGGAGACTCAAGACCGAAAAGACTGCATAGTAGCGAGCCGGATGTATGGGCCAGGCTGCTATGGTGGTGAGCCATTTTTCGTTGCGAGGGATCCAGATAATCTTGATGCTGATGAGGATGATGGGTACGTCGTGTGCTATGTTCATAATGAGAATACGGATGAATCGAGGTTCGTAGTCATGGATGCCAAGTCACCTAGCCTTGATGTTGTTGCCTCTGTGAAGCTACCTCAACGGGTGCCCTACGGATTTCATGGATTGTTTGTGAGGGATAAGGATCTCAAATCATCAGGGTGA

Click here to download the sequence:
Link to NCBI Nucleotide BLAST

Protein Sequence

>S_Transcript_6979.p1 GENE.S_Transcript_6979~~S_Transcript_6979.p1 ORF type:5prime_partial len:247 (+),score=40.40,RPE65|PF03055.11|3.2e-46 S_Transcript_6979:3-743(+)
IGMDPLGMLRGGSPVGLNPSKVSRVGVIPRYASDEKDMRWFDVPGFNIIHAINAWDEIDENGNETIVMVAPNILSAEHTLDKLELVHALVEKVRINLRTGVVSRQPLSARNLDFGVINPAYMGKKNKYVYAAVGDPMPKVTGVVKMDVLETQDRKDCIVASRMYGPGCYGGEPFFVARDPDNLDADEDDGYVVCYVHNENTDESRFVVMDAKSPSLDVVASVKLPQRVPYGFHGLFVRDKDLKSSG*

Click here to download the sequence:
Link to NCBI Protein BLAST